Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-153 | -3.532e+02 | 0.0000 | 147.0 | 16.74% | 306.9 | 0.64% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-106 | -2.453e+02 | 0.0000 | 146.0 | 16.63% | 649.2 | 1.36% | motif file (matrix) |
svg |
3 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-39 | -9.155e+01 | 0.0000 | 28.0 | 3.19% | 24.7 | 0.05% | motif file (matrix) |
svg |
4 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-17 | -4.091e+01 | 0.0000 | 74.0 | 8.43% | 1219.4 | 2.56% | motif file (matrix) |
svg |
5 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-16 | -3.777e+01 | 0.0000 | 179.0 | 20.39% | 5100.8 | 10.72% | motif file (matrix) |
svg |
6 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-15 | -3.678e+01 | 0.0000 | 71.0 | 8.09% | 1229.1 | 2.58% | motif file (matrix) |
svg |
7 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-15 | -3.615e+01 | 0.0000 | 84.0 | 9.57% | 1649.1 | 3.46% | motif file (matrix) |
svg |
8 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-13 | -3.190e+01 | 0.0000 | 53.0 | 6.04% | 822.2 | 1.73% | motif file (matrix) |
svg |
9 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-12 | -2.930e+01 | 0.0000 | 69.0 | 7.86% | 1370.1 | 2.88% | motif file (matrix) |
svg |
10 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-12 | -2.899e+01 | 0.0000 | 54.0 | 6.15% | 916.2 | 1.92% | motif file (matrix) |
svg |
11 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-12 | -2.872e+01 | 0.0000 | 34.0 | 3.87% | 392.3 | 0.82% | motif file (matrix) |
svg |
12 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-10 | -2.517e+01 | 0.0000 | 44.0 | 5.01% | 716.3 | 1.50% | motif file (matrix) |
svg |
13 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-10 | -2.392e+01 | 0.0000 | 46.0 | 5.24% | 804.5 | 1.69% | motif file (matrix) |
svg |
14 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-9 | -2.270e+01 | 0.0000 | 55.0 | 6.26% | 1119.5 | 2.35% | motif file (matrix) |
svg |
15 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-9 | -2.252e+01 | 0.0000 | 127.0 | 14.46% | 3841.2 | 8.07% | motif file (matrix) |
svg |
16 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-9 | -2.206e+01 | 0.0000 | 58.0 | 6.61% | 1239.3 | 2.60% | motif file (matrix) |
svg |
17 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-9 | -2.172e+01 | 0.0000 | 49.0 | 5.58% | 956.8 | 2.01% | motif file (matrix) |
svg |
18 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-9 | -2.157e+01 | 0.0000 | 43.0 | 4.90% | 774.9 | 1.63% | motif file (matrix) |
svg |
19 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-9 | -2.139e+01 | 0.0000 | 48.0 | 5.47% | 934.8 | 1.96% | motif file (matrix) |
svg |
20 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-8 | -1.998e+01 | 0.0000 | 51.0 | 5.81% | 1075.3 | 2.26% | motif file (matrix) |
svg |
21 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-8 | -1.989e+01 | 0.0000 | 32.0 | 3.64% | 495.7 | 1.04% | motif file (matrix) |
svg |
22 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-8 | -1.981e+01 | 0.0000 | 48.0 | 5.47% | 982.3 | 2.06% | motif file (matrix) |
svg |
23 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-8 | -1.915e+01 | 0.0000 | 34.0 | 3.87% | 569.0 | 1.20% | motif file (matrix) |
svg |
24 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-7 | -1.716e+01 | 0.0000 | 250.0 | 28.47% | 9878.5 | 20.75% | motif file (matrix) |
svg |
25 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-7 | -1.704e+01 | 0.0000 | 46.0 | 5.24% | 1008.4 | 2.12% | motif file (matrix) |
svg |
26 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-7 | -1.643e+01 | 0.0000 | 66.0 | 7.52% | 1755.6 | 3.69% | motif file (matrix) |
svg |
27 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-6 | -1.581e+01 | 0.0000 | 45.0 | 5.13% | 1018.2 | 2.14% | motif file (matrix) |
svg |
28 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-6 | -1.557e+01 | 0.0000 | 47.0 | 5.35% | 1097.9 | 2.31% | motif file (matrix) |
svg |
29 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.531e+01 | 0.0000 | 23.0 | 2.62% | 344.5 | 0.72% | motif file (matrix) |
svg |
30 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-6 | -1.472e+01 | 0.0000 | 23.0 | 2.62% | 356.2 | 0.75% | motif file (matrix) |
svg |
31 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-6 | -1.383e+01 | 0.0000 | 16.0 | 1.82% | 192.2 | 0.40% | motif file (matrix) |
svg |
32 |
| ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer | 1e-5 | -1.313e+01 | 0.0000 | 14.0 | 1.59% | 156.8 | 0.33% | motif file (matrix) |
svg |
33 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-5 | -1.234e+01 | 0.0000 | 54.0 | 6.15% | 1505.0 | 3.16% | motif file (matrix) |
svg |
34 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-4 | -1.150e+01 | 0.0001 | 51.0 | 5.81% | 1433.6 | 3.01% | motif file (matrix) |
svg |
35 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-4 | -1.147e+01 | 0.0001 | 45.0 | 5.13% | 1204.3 | 2.53% | motif file (matrix) |
svg |
36 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-4 | -1.143e+01 | 0.0001 | 17.0 | 1.94% | 260.4 | 0.55% | motif file (matrix) |
svg |
37 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-4 | -1.140e+01 | 0.0001 | 37.0 | 4.21% | 911.8 | 1.92% | motif file (matrix) |
svg |
38 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-4 | -1.121e+01 | 0.0001 | 29.0 | 3.30% | 638.8 | 1.34% | motif file (matrix) |
svg |
39 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-4 | -9.942e+00 | 0.0004 | 61.0 | 6.95% | 1933.8 | 4.06% | motif file (matrix) |
svg |
40 |
| Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-4 | -9.747e+00 | 0.0005 | 17.0 | 1.94% | 298.6 | 0.63% | motif file (matrix) |
svg |
41 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-4 | -9.644e+00 | 0.0006 | 21.0 | 2.39% | 425.4 | 0.89% | motif file (matrix) |
svg |
42 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-4 | -9.614e+00 | 0.0006 | 74.0 | 8.43% | 2510.5 | 5.27% | motif file (matrix) |
svg |
43 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-4 | -9.532e+00 | 0.0006 | 105.0 | 11.96% | 3896.6 | 8.19% | motif file (matrix) |
svg |
44 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-4 | -9.285e+00 | 0.0008 | 39.0 | 4.44% | 1087.5 | 2.28% | motif file (matrix) |
svg |
45 |
| GFX(?)/Promoter/Homer | 1e-4 | -9.212e+00 | 0.0008 | 7.0 | 0.80% | 56.3 | 0.12% | motif file (matrix) |
svg |
46 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.960e+00 | 0.0010 | 59.0 | 6.72% | 1920.3 | 4.03% | motif file (matrix) |
svg |
47 |
| YY1(Zf)/Promoter/Homer | 1e-3 | -8.884e+00 | 0.0011 | 14.0 | 1.59% | 231.6 | 0.49% | motif file (matrix) |
svg |
48 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-3 | -8.357e+00 | 0.0018 | 27.0 | 3.08% | 680.2 | 1.43% | motif file (matrix) |
svg |
49 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-3 | -8.006e+00 | 0.0025 | 182.0 | 20.73% | 7759.1 | 16.30% | motif file (matrix) |
svg |
50 |
| CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-3 | -7.782e+00 | 0.0030 | 5.0 | 0.57% | 33.9 | 0.07% | motif file (matrix) |
svg |
51 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-3 | -7.243e+00 | 0.0051 | 15.0 | 1.71% | 305.9 | 0.64% | motif file (matrix) |
svg |
52 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -6.956e+00 | 0.0067 | 54.0 | 6.15% | 1865.8 | 3.92% | motif file (matrix) |
svg |
53 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-2 | -6.876e+00 | 0.0071 | 35.0 | 3.99% | 1069.4 | 2.25% | motif file (matrix) |
svg |
54 |
| Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer | 1e-2 | -6.875e+00 | 0.0071 | 21.0 | 2.39% | 526.6 | 1.11% | motif file (matrix) |
svg |
55 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.698e+00 | 0.0082 | 65.0 | 7.40% | 2375.3 | 4.99% | motif file (matrix) |
svg |
56 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-2 | -6.588e+00 | 0.0089 | 64.0 | 7.29% | 2341.8 | 4.92% | motif file (matrix) |
svg |
57 |
| GFY(?)/Promoter/Homer | 1e-2 | -6.429e+00 | 0.0103 | 11.0 | 1.25% | 202.4 | 0.43% | motif file (matrix) |
svg |
58 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.412e+00 | 0.0103 | 49.0 | 5.58% | 1694.8 | 3.56% | motif file (matrix) |
svg |
59 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-2 | -6.397e+00 | 0.0103 | 12.0 | 1.37% | 234.7 | 0.49% | motif file (matrix) |
svg |
60 |
| RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer | 1e-2 | -6.259e+00 | 0.0116 | 12.0 | 1.37% | 238.1 | 0.50% | motif file (matrix) |
svg |
61 |
| ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.109e+00 | 0.0133 | 4.0 | 0.46% | 29.5 | 0.06% | motif file (matrix) |
svg |
62 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.010e+00 | 0.0144 | 83.0 | 9.45% | 3277.8 | 6.89% | motif file (matrix) |
svg |
63 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-2 | -5.876e+00 | 0.0162 | 43.0 | 4.90% | 1479.9 | 3.11% | motif file (matrix) |
svg |
64 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.824e+00 | 0.0168 | 42.0 | 4.78% | 1440.2 | 3.03% | motif file (matrix) |
svg |
65 |
| X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -5.715e+00 | 0.0185 | 11.0 | 1.25% | 222.5 | 0.47% | motif file (matrix) |
svg |
66 |
| Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.709e+00 | 0.0185 | 12.0 | 1.37% | 255.8 | 0.54% | motif file (matrix) |
svg |
67 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-2 | -5.659e+00 | 0.0189 | 47.0 | 5.35% | 1673.2 | 3.52% | motif file (matrix) |
svg |
68 |
| ETS(ETS)/Promoter/Homer | 1e-2 | -5.524e+00 | 0.0214 | 32.0 | 3.64% | 1037.6 | 2.18% | motif file (matrix) |
svg |
69 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-2 | -5.109e+00 | 0.0319 | 54.0 | 6.15% | 2042.3 | 4.29% | motif file (matrix) |
svg |
70 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -4.850e+00 | 0.0407 | 184.0 | 20.96% | 8438.2 | 17.73% | motif file (matrix) |
svg |
71 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-2 | -4.710e+00 | 0.0462 | 7.0 | 0.80% | 124.6 | 0.26% | motif file (matrix) |
svg |
72 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -4.666e+00 | 0.0476 | 95.0 | 10.82% | 4039.1 | 8.49% | motif file (matrix) |
svg |
73 |
| FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer | 1e-2 | -4.654e+00 | 0.0476 | 25.0 | 2.85% | 806.1 | 1.69% | motif file (matrix) |
svg |
74 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.636e+00 | 0.0477 | 35.0 | 3.99% | 1237.3 | 2.60% | motif file (matrix) |
svg |