Information for 6-AAGGTCAAAG (Motif 5)

T C G A G T C A C T A G A C T G C A G T T A G C T G C A T G C A T C G A A T C G
Reverse Opposite:
T A G C A G C T A C G T A C G T A T C G G T C A T G A C G A T C C A G T A G C T
p-value:1e-15
log p-value:-3.666e+01
Information Content per bp:1.655
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif5.81%
Number of Background Sequences with motif678.3
Percentage of Background Sequences with motif1.43%
Average Position of motif in Targets47.7 +/- 25.9bp
Average Position of motif in Background49.2 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--AAGGTCAAAG
TCAAGGTCAN--
 A C G T A C G T T C G A G T C A C T A G A C T G C A G T T A G C T G C A T G C A T C G A A T C G
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:2
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--AAGGTCAAAG
TCAAGGTCAT--
 A C G T A C G T T C G A G T C A C T A G A C T G C A G T T A G C T G C A T G C A T C G A A T C G
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.83
Offset:0
Orientation:forward strand
Alignment:AAGGTCAAAG
AAGGTCAC--
 T C G A G T C A C T A G A C T G C A G T T A G C T G C A T G C A T C G A A T C G
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:4
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--AAGGTCAAAG
TCAAGGTCATA-
 A C G T A C G T T C G A G T C A C T A G A C T G C A G T T A G C T G C A T G C A T C G A A T C G
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:5
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-AAGGTCAAAG-
AAAGATCAAAGG
 A C G T T C G A G T C A C T A G A C T G C A G T T A G C T G C A T G C A T C G A A T C G A C G T
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.81
Offset:-5
Orientation:forward strand
Alignment:-----AAGGTCAAAG-
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T A C G T T C G A G T C A C T A G A C T G C A G T T A G C T G C A T G C A T C G A A T C G A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--AAGGTCAAAG-
CAAAGGTCAAGGG
 A C G T A C G T T C G A G T C A C T A G A C T G C A G T T A G C T G C A T G C A T C G A A T C G A C G T
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

LEF1/MA0768.1/Jaspar

Match Rank:8
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-AAGGTCAAAG----
AAAGATCAAAGGGTT
 A C G T T C G A G T C A C T A G A C T G C A G T T A G C T G C A T G C A T C G A A T C G A C G T A C G T A C G T A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.80
Offset:-5
Orientation:forward strand
Alignment:-----AAGGTCAAAG--
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A C G T A C G T T C G A G T C A C T A G A C T G C A G T T A G C T G C A T G C A T C G A A T C G A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.80
Offset:-5
Orientation:reverse strand
Alignment:-----AAGGTCAAAG
ANGNAAAGGTCA---
 A C G T A C G T A C G T A C G T A C G T T C G A G T C A C T A G A C T G C A G T T A G C T G C A T G C A T C G A A T C G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T