Information for 6-GGGGCCTGGCAAATCC (Motif 14)

A T C G A C T G C A T G C T A G A T G C A G T C A C G T A C T G A C T G T A G C C T G A T C G A G T C A A G C T A G T C A G T C
Reverse Opposite:
A C T G A C T G T C G A A C G T A C G T A G C T A C T G A G T C A G T C G T C A A C T G A T C G A G T C G T A C A G T C T A G C
p-value:1e-10
log p-value:-2.478e+01
Information Content per bp:1.786
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.2 +/- 21.7bp
Average Position of motif in Background39.9 +/- 3.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:GGGGCCTGGCAAATCC-
-------GGAAATTCCC
 A T C G A C T G C A T G C T A G A T G C A G T C A C G T A C T G A C T G T A G C C T G A T C G A G T C A A G C T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:GGGGCCTGGCAAATCC-
-------GGAAATCCCC
 A T C G A C T G C A T G C T A G A T G C A G T C A C G T A C T G A C T G T A G C C T G A T C G A G T C A A G C T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:GGGGCCTGGCAAATCC-
-------GGAAANCCCC
 A T C G A C T G C A T G C T A G A T G C A G T C A C G T A C T G A C T G T A G C C T G A T C G A G T C A A G C T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GGGGCCTGGCAAATCC--
------GGGAAATCCCCN
 A T C G A C T G C A T G C T A G A T G C A G T C A C G T A C T G A C T G T A G C C T G A T C G A G T C A A G C T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

KLF16/MA0741.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGGGCCTGGCAAATCC
GGGGGCGTGGC------
 A C G T A T C G A C T G C A T G C T A G A T G C A G T C A C G T A C T G A C T G T A G C C T G A T C G A G T C A A G C T A G T C A G T C
C T A G C A T G C T A G A T C G A C T G G A T C C A T G A C G T C A T G C A T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGGGCCTGGCAAATCC-
--TGCCTGCGYCMCCTT
 A T C G A C T G C A T G C T A G A T G C A G T C A C G T A C T G A C T G T A G C C T G A T C G A G T C A A G C T A G T C A G T C A C G T
A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GGGGCCTGGCAAATCC-
-------GGAAATTCCC
 A T C G A C T G C A T G C T A G A T G C A G T C A C G T A C T G A C T G T A G C C T G A T C G A G T C A A G C T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

SP3/MA0746.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGGGCCTGGCAAATCC
GGGGGCGTGGN------
 A C G T A T C G A C T G C A T G C T A G A T G C A G T C A C G T A C T G A C T G T A G C C T G A T C G A G T C A A G C T A G T C A G T C
C T A G C A T G T C A G C A T G C A T G G A T C C T A G A C G T C A T G C A T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GGGGCCTGGCAAATCC
NNAGGGGCGGGGTNNA---
 A C G T A C G T A C G T A T C G A C T G C A T G C T A G A T G C A G T C A C G T A C T G A C T G T A G C C T G A T C G A G T C A A G C T A G T C A G T C
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A A C G T A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GGGGCCTGGCAAATCC
NAAGGGGGCGTGGCTTN---
 A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G A T G C A G T C A C G T A C T G A C T G T A G C C T G A T C G A G T C A A G C T A G T C A G T C
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A A C G T A C G T A C G T