Information for 11-RTGACTCAYC (Motif 11)

C T A G A C G T A C T G G C T A A T G C A C G T T G A C G T C A A G C T T A G C
Reverse Opposite:
A T C G C T G A C A G T A C T G T G C A A T C G C G A T T G A C T G C A A G T C
p-value:1e-10
log p-value:-2.527e+01
Information Content per bp:1.648
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.16%
Number of Background Sequences with motif129.6
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets56.9 +/- 18.6bp
Average Position of motif in Background51.4 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0142.1_Jundm2_2/Jaspar

Match Rank:1
Score:0.96
Offset:-3
Orientation:reverse strand
Alignment:---RTGACTCAYC---
NNGGTGACTCATCANN
 A C G T A C G T A C G T C T A G A C G T A C T G G C T A A T G C A C G T T G A C G T C A A G C T T A G C A C G T A C G T A C G T
C A G T G A C T C A T G T C A G A G C T A C T G C G T A A T G C C A G T T G A C C T G A A G C T G A T C T G C A G T C A A C G T

JUND/MA0491.1/Jaspar

Match Rank:2
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-RTGACTCAYC
GGTGACTCATC
 A C G T C T A G A C G T A C T G G C T A A T G C A C G T T G A C G T C A A G C T T A G C
C T A G T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T T A G C

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:3
Score:0.95
Offset:-2
Orientation:forward strand
Alignment:--RTGACTCAYC
GGATGACTCATC
 A C G T A C G T C T A G A C G T A C T G G C T A A T G C A C G T T G A C G T C A A G C T T A G C
C A T G C T A G T C G A A C G T A C T G C G T A T A G C C G A T T G A C C G T A A G C T G A T C

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:4
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-RTGACTCAYC-
DATGASTCATHN
 A C G T C T A G A C G T A C T G G C T A A T G C A C G T T G A C G T C A A G C T T A G C A C G T
C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T G A T C G T A C

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-RTGACTCAYC-
NATGACTCATNN
 A C G T C T A G A C G T A C T G G C T A A T G C A C G T T G A C G T C A A G C T T A G C A C G T
C T A G T C G A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A G C T G A T C G T A C

FOSL1/MA0477.1/Jaspar

Match Rank:6
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-RTGACTCAYC
GGTGACTCATG
 A C G T C T A G A C G T A C T G G C T A A T G C A C G T T G A C G T C A A G C T T A G C
C T A G T C A G A C G T A C T G C G T A T A G C A C G T G T A C C G T A A C G T T A C G

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:7
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:RTGACTCAYC
ATGASTCATY
 C T A G A C G T A C T G G C T A A T G C A C G T T G A C G T C A A G C T T A G C
T C G A G A C T C A T G G C T A A T C G C G A T G T A C C G T A A G C T G A T C

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.95
Offset:0
Orientation:forward strand
Alignment:RTGACTCAYC
ATGACTCATC
 C T A G A C G T A C T G G C T A A T G C A C G T T G A C G T C A A G C T T A G C
T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C

FOSL2/MA0478.1/Jaspar

Match Rank:9
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--RTGACTCAYC
GGATGACTCAT-
 A C G T A C G T C T A G A C G T A C T G G C T A A T G C A C G T T G A C G T C A A G C T T A G C
A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T A C G T

JUNB/MA0490.1/Jaspar

Match Rank:10
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--RTGACTCAYC
GGATGACTCAT-
 A C G T A C G T C T A G A C G T A C T G G C T A A T G C A C G T T G A C G T C A A G C T T A G C
C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T A C G T