Information for 10-AAAGCAACCG (Motif 10)

T C G A G C T A C T G A A T C G G T A C T C G A C G T A T G A C A G T C C T A G
Reverse Opposite:
G A T C T C A G A C T G G C A T A C G T C A T G T A G C G A C T C G A T A G C T
p-value:1e-12
log p-value:-2.794e+01
Information Content per bp:1.657
Number of Target Sequences with motif86.0
Percentage of Target Sequences with motif9.79%
Number of Background Sequences with motif1992.7
Percentage of Background Sequences with motif4.19%
Average Position of motif in Targets51.8 +/- 24.3bp
Average Position of motif in Background49.9 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----AAAGCAACCG-
CCGCATAGCAACGGA
 A C G T A C G T A C G T A C G T T C G A G C T A C T G A A T C G G T A C T C G A C G T A T G A C A G T C C T A G A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AAAGCAACCG-
TACCATAGCAACGGT
 A C G T A C G T A C G T A C G T T C G A G C T A C T G A A T C G G T A C T C G A C G T A T G A C A G T C C T A G A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AAAGCAACCG
SCCTAGCAACAG
 A C G T A C G T T C G A G C T A C T G A A T C G G T A C T C G A C G T A T G A C A G T C C T A G
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.63
Offset:-8
Orientation:forward strand
Alignment:--------AAAGCAACCG-----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G C T A C T G A A T C G G T A C T C G A C G T A T G A C A G T C C T A G A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0033.1_Irf3_1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AAAGCAACCG
GAGAACCGAAACTG
 A C G T A C G T A C G T A C G T T C G A G C T A C T G A A T C G G T A C T C G A C G T A T G A C A G T C C T A G
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AAAGCAACCG---
-----AACCGANA
 T C G A G C T A C T G A A T C G G T A C T C G A C G T A T G A C A G T C C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

SCRT2/MA0744.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAAGCAACCG----
-ATGCAACAGGTGG
 T C G A G C T A C T G A A T C G G T A C T C G A C G T A T G A C A G T C C T A G A C G T A C G T A C G T A C G T
A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AAAGCAACCG---
---NHAACBGYYV
 T C G A G C T A C T G A A T C G G T A C T C G A C G T A T G A C A G T C C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

IRF9/MA0653.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAAGCAACCG-----
AACGAAACCGAAACT
 T C G A G C T A C T G A A T C G G T A C T C G A C G T A T G A C A G T C C T A G A C G T A C G T A C G T A C G T A C G T
G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AAAGCAACCG--
----YAACBGCC
 T C G A G C T A C T G A A T C G G T A C T C G A C G T A T G A C A G T C C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C