Information for 1-RTTGCGCAATNNN (Motif 1)

T C A G A C G T A C G T C T A G A G T C C T A G G A T C G T C A C G T A A G C T G T C A A T C G A T C G
Reverse Opposite:
T A G C T A C G C A G T T C G A A C G T A C G T C A T G G A T C T C A G G A T C C G T A C G T A A G T C
p-value:1e-95
log p-value:-2.188e+02
Information Content per bp:1.603
Number of Target Sequences with motif107.0
Percentage of Target Sequences with motif12.99%
Number of Background Sequences with motif339.8
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets52.3 +/- 18.0bp
Average Position of motif in Background48.5 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBPE/MA0837.1/Jaspar

Match Rank:1
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:RTTGCGCAATNNN
ATTGCGCAAT---
 T C A G A C G T A C G T C T A G A G T C C T A G G A T C G T C A C G T A A G C T G T C A A T C G A T C G
T C G A C G A T C A G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T A C G T A C G T A C G T

CEBPB/MA0466.2/Jaspar

Match Rank:2
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:RTTGCGCAATNNN
ATTGCGCAAT---
 T C A G A C G T A C G T C T A G A G T C C T A G G A T C G T C A C G T A A G C T G T C A A T C G A T C G
T C G A C A G T A C G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T A C G T A C G T A C G T

CEBPD/MA0836.1/Jaspar

Match Rank:3
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:RTTGCGCAATNNN
ATTGCGCAAT---
 T C A G A C G T A C G T C T A G A G T C C T A G G A T C G T C A C G T A A G C T G T C A A T C G A T C G
T C G A A C G T C A G T C A T G A G T C C T A G G A T C G T C A G T C A A G C T A C G T A C G T A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:RTTGCGCAATNNN
GTTGCGCAAT---
 T C A G A C G T A C G T C T A G A G T C C T A G G A T C G T C A C G T A A G C T G T C A A T C G A T C G
T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T A C G T A C G T

CEBPG/MA0838.1/Jaspar

Match Rank:5
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:RTTGCGCAATNNN
ATTGCGCAAT---
 T C A G A C G T A C G T C T A G A G T C C T A G G A T C G T C A C G T A A G C T G T C A A T C G A T C G
T C G A G C A T G A C T C T A G G A T C C T A G G A T C G T C A G T C A A G C T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:6
Score:0.89
Offset:0
Orientation:forward strand
Alignment:RTTGCGCAATNNN
ATTGCACAATA--
 T C A G A C G T A C G T C T A G A G T C C T A G G A T C G T C A C G T A A G C T G T C A A T C G A T C G
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:7
Score:0.88
Offset:0
Orientation:forward strand
Alignment:RTTGCGCAATNNN
ATTGCATAA----
 T C A G A C G T A C G T C T A G A G T C C T A G G A T C G T C A C G T A A G C T G T C A A T C G A T C G
T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A A C G T A C G T A C G T A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:8
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:RTTGCGCAATNNN
VTTRCATAAY---
 T C A G A C G T A C G T C T A G A G T C C T A G G A T C G T C A C G T A A G C T G T C A A T C G A T C G
T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T A C G T A C G T

HLF/MA0043.2/Jaspar

Match Rank:9
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-RTTGCGCAATNNN
CATTACGTAACC--
 A C G T T C A G A C G T A C G T C T A G A G T C C T A G G A T C G T C A C G T A A G C T G T C A A T C G A T C G
G A T C T C G A G C A T A C G T C T G A A G T C T C A G G A C T G T C A C G T A A G T C G T A C A C G T A C G T

DBP/MA0639.1/Jaspar

Match Rank:10
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-RTTGCGCAATNNN
TATTACGTAACA--
 A C G T T C A G A C G T A C G T C T A G A G T C C T A G G A T C G T C A C G T A A G C T G T C A A T C G A T C G
A C G T T C G A G C A T A C G T C T G A A G T C T C A G A G C T T G C A C G T A A G T C T C G A A C G T A C G T