Information for 7-RGCCTKTMCCTGY (Motif 8)

C T G A A C T G A G T C A G T C A C G T A C T G C A G T G T C A A G T C A G T C A C G T A C T G A G C T
Reverse Opposite:
C T G A A G T C C G T A A C T G A C T G A C G T G C T A G T A C G T C A A C T G A C T G A G T C A G C T
p-value:1e-11
log p-value:-2.608e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.8 +/- 19.7bp
Average Position of motif in Background37.5 +/- 10.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:RGCCTKTMCCTGY
---CTGTTCCTGG
 C T G A A C T G A G T C A G T C A C G T A C T G C A G T G T C A A G T C A G T C A C G T A C T G A G C T
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:RGCCTKTMCCTGY
---RYHYACCTGB
 C T G A A C T G A G T C A G T C A C G T A C T G C A G T G T C A A G T C A G T C A C G T A C T G A G C T
A C G T A C G T A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-RGCCTKTMCCTGY
TGACCTTGACCT--
 A C G T C T G A A C T G A G T C A G T C A C G T A C T G C A G T G T C A A G T C A G T C A C G T A C T G A G C T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-RGCCTKTMCCTGY
TGACCTTGACCT--
 A C G T C T G A A C T G A G T C A G T C A C G T A C T G C A G T G T C A A G T C A G T C A C G T A C T G A G C T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----RGCCTKTMCCTGY---
RRCATGYCHGGACWTGYYYN
 A C G T A C G T A C G T A C G T C T G A A C T G A G T C A G T C A C G T A C T G C A G T G T C A A G T C A G T C A C G T A C T G A G C T A C G T A C G T A C G T
C T A G C T A G A G T C G C T A C G A T A C T G G A C T G A T C G A C T T C A G C T A G C T G A A T G C G C A T C G A T A C T G G A C T G A T C G A C T C G A T

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:RGCCTKTMCCTGY-
-----NCACCTGTN
 C T G A A C T G A G T C A G T C A C G T A C T G C A G T G T C A A G T C A G T C A C G T A C T G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.56
Offset:8
Orientation:forward strand
Alignment:RGCCTKTMCCTGY-
--------GCTGTG
 C T G A A C T G A G T C A G T C A C G T A C T G C A G T G T C A A G T C A G T C A C G T A C T G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:RGCCTKTMCCTGY-
--ACTTTCACTTTC
 C T G A A C T G A G T C A G T C A C G T A C T G C A G T G T C A A G T C A G T C A C G T A C T G A G C T A C G T
A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---RGCCTKTMCCTGY
CNAGGCCT--------
 A C G T A C G T A C G T C T G A A C T G A G T C A G T C A C G T A C T G C A G T G T C A A G T C A G T C A C G T A C T G A G C T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-RGCCTKTMCCTGY
TGACCTTTNCNT--
 A C G T C T G A A C T G A G T C A G T C A C G T A C T G C A G T G T C A A G T C A G T C A C G T A C T G A G C T
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T A C G T