Information for 5-AGGAGTGGTTTTCAAA (Motif 7)

C G T A A C T G A T C G C G T A A C T G G C A T C A T G A T C G C G A T A G C T A C G T A C G T G T A C C G T A C G T A C T G A
Reverse Opposite:
A G C T A C G T A C G T A C T G C G T A C G T A T C G A C G T A A T G C G A T C C G T A G T A C A C G T A T G C A G T C C G A T
p-value:1e-11
log p-value:-2.651e+01
Information Content per bp:1.774
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.2 +/- 25.8bp
Average Position of motif in Background62.3 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.66
Offset:6
Orientation:forward strand
Alignment:AGGAGTGGTTTTCAAA
------CGGTTTCAAA
 C G T A A C T G A T C G C G T A A C T G G C A T C A T G A T C G C G A T A G C T A C G T A C G T G T A C C G T A C G T A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:AGGAGTGGTTTTCAAA-
--------NATTCAAAT
 C G T A A C T G A T C G C G T A A C T G G C A T C A T G A T C G C G A T A G C T A C G T A C G T G T A C C G T A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.56
Offset:8
Orientation:forward strand
Alignment:AGGAGTGGTTTTCAAA--
--------ACATCAAAGG
 C G T A A C T G A T C G C G T A A C T G G C A T C A T G A T C G C G A T A G C T A C G T A C G T G T A C C G T A C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.51
Offset:6
Orientation:forward strand
Alignment:AGGAGTGGTTTTCAAA----
------AAAGATCAAAGGAA
 C G T A A C T G A T C G C G T A A C T G G C A T C A T G A T C G C G A T A G C T A C G T A C G T G T A C C G T A C G T A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.51
Offset:8
Orientation:forward strand
Alignment:AGGAGTGGTTTTCAAA--
--------ACWTCAAAGG
 C G T A A C T G A T C G C G T A A C T G G C A T C A T G A T C G C G A T A G C T A C G T A C G T G T A C C G T A C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

MTF1/MA0863.1/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:AGGAGTGGTTTTCAAA
--GTGCCGTGTGCAAA
 C G T A A C T G A T C G C G T A A C T G G C A T C A T G A T C G C G A T A G C T A C G T A C G T G T A C C G T A C G T A C T G A
A C G T A C G T C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.50
Offset:5
Orientation:forward strand
Alignment:AGGAGTGGTTTTCAAA------
-----TATAGATCAAAGGAAAA
 C G T A A C T G A T C G C G T A A C T G G C A T C A T G A T C G C G A T A G C T A C G T A C G T G T A C C G T A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

HOXC12/MA0906.1/Jaspar

Match Rank:8
Score:0.50
Offset:6
Orientation:forward strand
Alignment:AGGAGTGGTTTTCAAA-
------GGTCGTAAAAA
 C G T A A C T G A T C G C G T A A C T G G C A T C A T G A T C G C G A T A G C T A C G T A C G T G T A C C G T A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.50
Offset:8
Orientation:forward strand
Alignment:AGGAGTGGTTTTCAAA
--------TTTTCCA-
 C G T A A C T G A T C G C G T A A C T G G C A T C A T G A T C G C G A T A G C T A C G T A C G T G T A C C G T A C G T A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:10
Score:0.49
Offset:6
Orientation:forward strand
Alignment:AGGAGTGGTTTTCAAA-
------GGTCGTAAAAT
 C G T A A C T G A T C G C G T A A C T G G C A T C A T G A T C G C G A T A G C T A C G T A C G T G T A C C G T A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T