Information for 4-MTSTTGACCWTCT (Motif 3)

T G A C A C G T A T G C A C G T A C G T A C T G C G T A A G T C A G T C G C A T A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A C G T A C T A G A C T G A C G T A G T C C G T A C G T A A T C G C G T A A C G T
p-value:1e-13
log p-value:-3.127e+01
Information Content per bp:1.890
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.3 +/- 28.1bp
Average Position of motif in Background59.3 +/- 10.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrrg/MA0643.1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:MTSTTGACCWTCT
---ATGACCTTGA
 T G A C A C G T A T G C A C G T A C G T A C T G C G T A A G T C A G T C G C A T A C G T A G T C A C G T
A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

NR2F1/MA0017.2/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:MTSTTGACCWTCT
CNNTTGACCTTTG
 T G A C A C G T A T G C A C G T A C G T A C T G C G T A A G T C A G T C G C A T A C G T A G T C A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:MTSTTGACCWTCT---
NNNNTGACCTTTNNNN
 T G A C A C G T A T G C A C G T A C G T A C T G C G T A A G T C A G T C G C A T A C G T A G T C A C G T A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:MTSTTGACCWTCT
---GTGACCTT--
 T G A C A C G T A T G C A C G T A C G T A C T G C G T A A G T C A G T C G C A T A C G T A G T C A C G T
A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:MTSTTGACCWTCT-
----TGACCTTGAT
 T G A C A C G T A T G C A C G T A C G T A C T G C G T A A G T C A G T C G C A T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:MTSTTGACCWTCT
----TGACCT---
 T G A C A C G T A T G C A C G T A C G T A C T G C G T A A G T C A G T C G C A T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.66
Offset:3
Orientation:forward strand
Alignment:MTSTTGACCWTCT
---NTGACCTTGA
 T G A C A C G T A T G C A C G T A C G T A C T G C G T A A G T C A G T C G C A T A C G T A G T C A C G T
A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

PB0053.1_Rara_1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:MTSTTGACCWTCT---
NNNGTGACCTTTGNNN
 T G A C A C G T A T G C A C G T A C G T A C T G C G T A A G T C A G T C G C A T A C G T A G T C A C G T A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-MTSTTGACCWTCT---
NNNNATGACCTTGANTN
 A C G T T G A C A C G T A T G C A C G T A C G T A C T G C G T A A G T C A G T C G C A T A C G T A G T C A C G T A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:MTSTTGACCWTCT
--BNTGDCCTTG-
 T G A C A C G T A T G C A C G T A C G T A C T G C G T A A G T C A G T C G C A T A C G T A G T C A C G T
A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T