Information for 10-CCGRGCAATK (Motif 21)

G A T C T A G C A C T G T C A G T C A G T G A C C G T A T G C A A G C T C A T G
Reverse Opposite:
G T A C C T G A A C G T C G A T A C T G A G T C A G T C G T A C A T C G C T A G
p-value:1e-6
log p-value:-1.445e+01
Information Content per bp:1.629
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif6.61%
Number of Background Sequences with motif1274.3
Percentage of Background Sequences with motif2.75%
Average Position of motif in Targets54.5 +/- 26.3bp
Average Position of motif in Background49.8 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hmx1/MA0896.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCGRGCAATK-------
ACAAGCAATTAATGAAT
 G A T C T A G C A C T G T C A G T C A G T G A C C G T A T G C A A G C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCGRGCAATK-------
ACAAGCAATTAATGAAT
 G A T C T A G C A C T G T C A G T C A G T G A C C G T A T G C A A G C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0024.1_Dlx5/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCGRGCAATK-------
-GGGGTAATTAGCTCTG
 G A T C T A G C A C T G T C A G T C A G T G A C C G T A T G C A A G C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T C G A T C G T C A G T C A G G A C T G T C A C G T A G A C T C A G T C T G A T A C G A G T C A C G T T G A C A C G T A T C G

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCGRGCAATK----
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T G A T C T A G C A C T G T C A G T C A G T G A C C G T A T G C A A G C T C A T G A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PB0173.1_Sox21_2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCGRGCAATK----
NNNNNGAACAATTGANN
 A C G T A C G T A C G T G A T C T A G C A C T G T C A G T C A G T G A C C G T A T G C A A G C T C A T G A C G T A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCGRGCAATK-
-VRAACAATGG
 G A T C T A G C A C T G T C A G T C A G T G A C C G T A T G C A A G C T C A T G A C G T
A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

PH0063.1_Hoxb8/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCGRGCAATK------
ACCGGCAATTAATAAA
 G A T C T A G C A C T G T C A G T C A G T G A C C G T A T G C A A G C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A

SOX9/MA0077.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCGRGCAATK-
--GAACAATGG
 G A T C T A G C A C T G T C A G T C A G T G A C C G T A T G C A A G C T C A T G A C G T
A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G

Hmx3/MA0898.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCGRGCAATK-------
ACAAGCAATTAAAGAAT
 G A T C T A G C A C T G T C A G T C A G T G A C C G T A T G C A A G C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PH0043.1_Hmx3/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCGRGCAATK-------
ACAAGCAATTAAAGAAT
 G A T C T A G C A C T G T C A G T C A G T G A C C G T A T G C A A G C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T