Information for 14-CACAAGGGGGAGC (Motif 20)

A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C T G A C T G A C T G C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G T C A G T C G T A C A G T C A G T C A C G T C G A T A C T G A C G T A C T G
p-value:1e-7
log p-value:-1.779e+01
Information Content per bp:1.952
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.0 +/- 30.2bp
Average Position of motif in Background35.6 +/- 13.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CACAAGGGGGAGC-----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CACAAGGGGGAGC--
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CACAAGGGGGAGC---
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CACAAGGGGGAGC
--GGAGGGGGAA-
 A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C T G A C T G A C T G C G T A A C T G A G T C
A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:CACAAGGGGGAGC
-------CGGAGC
 A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C T G A C T G A C T G C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CACAAGGGGGAGC
-----TGGGGA--
 A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C T G A C T G A C T G C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CACAAGGGGGAGC----
NNNAAGGGGGCGGGNNN
 A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0132.1_Hbp1_2/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CACAAGGGGGAGC
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C T G A C T G A C T G C G T A A C T G A G T C
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CACAAGGGGGAGC
AACAAAGG-----
 A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C T G A C T G A C T G C G T A A C T G A G T C
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CACAAGGGGGAGC-
CACAGCGGGGGGTC
 A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C T G A C T G A C T G C G T A A C T G A G T C A C G T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C