Information for 2-GTGCGCGCCCTGTGGC (Motif 2)

A T C G A C G T C T A G A G T C C A T G A G T C A C T G A T G C A G T C G T A C C A G T A T C G A C G T A C T G A C T G G T A C
Reverse Opposite:
C A T G G T A C G T A C C G T A A T G C G T C A C A T G C T A G T A C G A G T C C T A G G T A C C T A G A G T C C G T A A T G C
p-value:1e-14
log p-value:-3.265e+01
Information Content per bp:1.764
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.7 +/- 29.5bp
Average Position of motif in Background54.8 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0009.1_E2F3_1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTGCGCGCCCTGTGGC
ANCGCGCGCCCTTNN--
 A C G T A T C G A C G T C T A G A G T C C A T G A G T C A C T G A T G C A G T C G T A C C A G T A T C G A C G T A C T G A C T G G T A C
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GTGCGCGCCCTGTGGC
NNGCNCTGCGCGGC-------
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T C T A G A G T C C A T G A G T C A C T G A T G C A G T C G T A C C A G T A T C G A C G T A C T G A C T G G T A C
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTGCGCGCCCTGTGGC
NTCGCGCGCCTTNNN--
 A C G T A T C G A C G T C T A G A G T C C A T G A G T C A C T G A T G C A G T C G T A C C A G T A T C G A C G T A C T G A C T G G T A C
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTGCGCGCCCTGTGGC
TTGCGTGCVA------
 A T C G A C G T C T A G A G T C C A T G A G T C A C T G A T G C A G T C G T A C C A G T A T C G A C G T A C T G A C T G G T A C
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:5
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GTGCGCGCCCTGTGGC
NVCAKCTGGNNNCCAGMTGB-
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T C T A G A G T C C A T G A G T C A C T G A T G C A G T C G T A C C A G T A T C G A C G T A C T G A C T G G T A C
T A C G T G A C T G A C C G T A A C T G T A G C C G A T A C T G A T C G A G C T A T G C T C G A T A G C G T A C C G T A A C T G T G A C G C A T A C T G A C T G A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTGCGCGCCCTGTGGC
-TGCGTG---------
 A T C G A C G T C T A G A G T C C A T G A G T C A C T G A T G C A G T C G T A C C A G T A T C G A C G T A C T G A C T G G T A C
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GTGCGCGCCCTGTGGC
NCANGCGCGCGCGCCA----
 A C G T A C G T A C G T A C G T A T C G A C G T C T A G A G T C C A T G A G T C A C T G A T G C A G T C G T A C C A G T A T C G A C G T A C T G A C T G G T A C
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A A C G T A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTGCGCGCCCTGTGGC
RGTTAGTGCCCY-----
 A C G T A T C G A C G T C T A G A G T C C A T G A G T C A C T G A T G C A G T C G T A C C A G T A T C G A C G T A C T G A C T G G T A C
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T A C G T A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GTGCGCGCCCTGTGGC
-AGCGCGCC-------
 A T C G A C G T C T A G A G T C C A T G A G T C A C T G A T G C A G T C G T A C C A G T A T C G A C G T A C T G A C T G G T A C
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GTGCGCGCCCTGTGGC
--GCTCGGSCTC----
 A T C G A C G T C T A G A G T C C A T G A G T C A C T G A T G C A G T C G T A C C A G T A T C G A C G T A C T G A C T G G T A C
A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T