Information for 10-GAGCCCNGCCTTC (Motif 13)

A C T G C G T A A C T G A T G C A G T C A G T C C G A T A T C G A T G C T A G C A G C T A C G T A T G C
Reverse Opposite:
T A C G G T C A T C G A A T C G A T C G A T G C G C T A A C T G C T A G A T C G A G T C G C A T A G T C
p-value:1e-9
log p-value:-2.164e+01
Information Content per bp:1.732
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif30.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets46.9 +/- 31.9bp
Average Position of motif in Background59.3 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAGCCCNGCCTTC
-GGCCCCGCCCCC
 A C T G C G T A A C T G A T G C A G T C A G T C C G A T A T C G A T G C T A G C A G C T A C G T A T G C
A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAGCCCNGCCTTC----
--GCCCCGCCCCCTCCC
 A C T G C G T A A C T G A T G C A G T C A G T C C G A T A T C G A T G C T A G C A G C T A C G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAGCCCNGCCTTC-
NAGCCCCGCCCCCN
 A C T G C G T A A C T G A T G C A G T C A G T C C G A T A T C G A T G C T A G C A G C T A C G T A T G C A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAGCCCNGCCTTC-
--GCTCCGCCCMCY
 A C T G C G T A A C T G A T G C A G T C A G T C C G A T A T C G A T G C T A G C A G C T A C G T A T G C A C G T
A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GAGCCCNGCCTTC
--GCCCCGCCCCC
 A C T G C G T A A C T G A T G C A G T C A G T C C G A T A T C G A T G C T A G C A G C T A C G T A T G C
A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GAGCCCNGCCTTC-
NNGGCCACGCCTTTN
 A C G T A C T G C G T A A C T G A T G C A G T C A G T C C G A T A T C G A T G C T A G C A G C T A C G T A T G C A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

PB0099.1_Zfp691_1/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GAGCCCNGCCTTC
NNNNTGAGCACTGTNNG-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C A G T C A G T C C G A T A T C G A T G C T A G C A G C T A C G T A T G C
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAGCCCNGCCTTC
GAGSCCGAGC---
 A C T G C G T A A C T G A T G C A G T C A G T C C G A T A T C G A T G C T A G C A G C T A C G T A T G C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GAGCCCNGCCTTC
-TGCCCAGNHW--
 A C T G C G T A A C T G A T G C A G T C A G T C C G A T A T C G A T G C T A G C A G C T A C G T A T G C
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GAGCCCNGCCTTC
NNNGGGGCGCCCCCNN-
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C A G T C A G T C C G A T A T C G A T G C T A G C A G C T A C G T A T G C
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T