Information for 2-NRWGTAAAYA (Motif 2)

G C A T T C A G C G A T C A T G A G C T T G C A T G C A C G T A A G T C C G T A
Reverse Opposite:
G C A T T C A G G C A T A C G T A C G T T C G A G T A C G C T A A G T C C G T A
p-value:1e-47
log p-value:-1.099e+02
Information Content per bp:1.474
Number of Target Sequences with motif95.0
Percentage of Target Sequences with motif10.98%
Number of Background Sequences with motif719.7
Percentage of Background Sequences with motif1.58%
Average Position of motif in Targets50.1 +/- 24.5bp
Average Position of motif in Background52.1 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:1
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:NRWGTAAAYA--
TATGTAAACANG
G C A T T C A G C G A T C A T G A G C T T G C A T G C A C G T A A G T C C G T A A C G T A C G T
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

FOXA1/MA0148.3/Jaspar

Match Rank:2
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-NRWGTAAAYA----
CAAAGTAAACANNNN
A C G T G C A T T C A G C G A T C A T G A G C T T G C A T G C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:3
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:NRWGTAAAYA
WAAGTAAAYA
G C A T T C A G C G A T C A T G A G C T T G C A T G C A C G T A A G T C C G T A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.90
Offset:0
Orientation:forward strand
Alignment:NRWGTAAAYA
AAAGTAAACA
G C A T T C A G C G A T C A T G A G C T T G C A T G C A C G T A A G T C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:5
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--NRWGTAAAYA---
NCWRWGTAAACANSV
A C G T A C G T G C A T T C A G C G A T C A T G A G C T T G C A T G C A C G T A A G T C C G T A A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:6
Score:0.90
Offset:0
Orientation:forward strand
Alignment:NRWGTAAAYA
AAAGTAAACA
G C A T T C A G C G A T C A T G A G C T T G C A T G C A C G T A A G T C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

Foxa2/MA0047.2/Jaspar

Match Rank:7
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--NRWGTAAAYA
NCTAAGTAAACA
A C G T A C G T G C A T T C A G C G A T C A T G A G C T T G C A T G C A C G T A A G T C C G T A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.89
Offset:-5
Orientation:forward strand
Alignment:-----NRWGTAAAYA--
NNNVCTGWGYAAACASN
A C G T A C G T A C G T A C G T A C G T G C A T T C A G C G A T C A T G A G C T T G C A T G C A C G T A A G T C C G T A A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

FOXI1/MA0042.2/Jaspar

Match Rank:9
Score:0.87
Offset:3
Orientation:forward strand
Alignment:NRWGTAAAYA
---GTAAACA
G C A T T C A G C G A T C A T G A G C T T G C A T G C A C G T A A G T C C G T A
A C G T A C G T A C G T T C A G G C A T T G C A G T C A C G T A G A T C T C G A

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:10
Score:0.86
Offset:2
Orientation:forward strand
Alignment:NRWGTAAAYA
--DGTAAACA
G C A T T C A G C G A T C A T G A G C T T G C A T G C A C G T A A G T C C G T A
A C G T A C G T C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A