Information for 8-YCATTGTTTG (Motif 11)

A G C T T A G C G C T A A C G T A C G T A C T G A G C T A G C T A C G T A C T G
Reverse Opposite:
T G A C C G T A C T G A C T G A A G T C C G T A T G C A C G A T A T C G T C G A
p-value:1e-12
log p-value:-2.965e+01
Information Content per bp:1.760
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.58%
Number of Background Sequences with motif304.2
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets52.0 +/- 19.4bp
Average Position of motif in Background48.2 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.89
Offset:0
Orientation:forward strand
Alignment:YCATTGTTTG
CCATTGTTYB
 A G C T T A G C G C T A A C G T A C G T A C T G A G C T A G C T A C G T A C T G
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox6/MA0515.1/Jaspar

Match Rank:2
Score:0.89
Offset:0
Orientation:forward strand
Alignment:YCATTGTTTG
CCATTGTTTT
 A G C T T A G C G C T A A C G T A C G T A C T G A G C T A G C T A C G T A C T G
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:3
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-YCATTGTTTG
NCCATTGTTY-
 A C G T A G C T T A G C G C T A A C G T A C G T A C T G A G C T A G C T A C G T A C T G
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.84
Offset:0
Orientation:forward strand
Alignment:YCATTGTTTG
CCWTTGTYYB
 A G C T T A G C G C T A A C G T A C G T A C T G A G C T A G C T A C G T A C T G
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

SOX9/MA0077.1/Jaspar

Match Rank:5
Score:0.83
Offset:0
Orientation:forward strand
Alignment:YCATTGTTTG
CCATTGTTC-
 A G C T T A G C G C T A A C G T A C G T A C T G A G C T A G C T A C G T A C T G
A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T

Sox5/MA0087.1/Jaspar

Match Rank:6
Score:0.83
Offset:2
Orientation:forward strand
Alignment:YCATTGTTTG
--ATTGTTA-
 A G C T T A G C G C T A A C G T A C G T A C T G A G C T A G C T A C G T A C T G
A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.82
Offset:0
Orientation:forward strand
Alignment:YCATTGTTTG
CCATTGTTNY
 A G C T T A G C G C T A A C G T A C G T A C T G A G C T A G C T A C G T A C T G
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

SRY/MA0084.1/Jaspar

Match Rank:8
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:YCATTGTTTG-
--ATTGTTTAN
 A G C T T A G C G C T A A C G T A C G T A C T G A G C T A G C T A C G T A C T G A C G T
A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---YCATTGTTTG--
NNNCCATTGTGTNAN
 A C G T A C G T A C G T A G C T T A G C G C T A A C G T A C G T A C T G A G C T A G C T A C G T A C T G A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-YCATTGTTTG
NCCATTGTTC-
 A C G T A G C T T A G C G C T A A C G T A C G T A C T G A G C T A G C T A C G T A C T G
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T