Information for 6-KCKTGACACMKGCCCC (Motif 10)

A C G T A T G C A C G T A C G T A C T G C G T A A G T C C G T A A G T C G T C A A C T G A C T G A T G C A G T C A T G C A G T C
Reverse Opposite:
A C T G A T C G C T A G A T C G A G T C G T A C A C G T A C T G A C G T A C T G A C G T G T A C C G T A T G C A A T C G G T C A
p-value:1e-13
log p-value:-3.039e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets71.5 +/- 22.8bp
Average Position of motif in Background88.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PKNOX2/MA0783.1/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:KCKTGACACMKGCCCC
---TGACACCTGTCA-
 A C G T A T G C A C G T A C G T A C T G C G T A A G T C C G T A A G T C G T C A A C T G A C T G A T G C A G T C A T G C A G T C
A C G T A C G T A C G T G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A A C G T

HES5/MA0821.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:KCKTGACACMKGCCCC
---CGGCACGTGCCA-
 A C G T A T G C A C G T A C G T A C T G C G T A A G T C C G T A A G T C G T C A A C T G A C T G A T G C A G T C A T G C A G T C
A C G T A C G T A C G T G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:KCKTGACACMKGCCCC
-KTTCACACCT-----
 A C G T A T G C A C G T A C G T A C T G C G T A A G T C C G T A A G T C G T C A A C T G A C T G A T G C A G T C A T G C A G T C
A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:KCKTGACACMKGCCCC
--TTGACAG-------
 A C G T A T G C A C G T A C G T A C T G C G T A A G T C C G T A A G T C G T C A A C T G A C T G A T G C A G T C A T G C A G T C
A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:KCKTGACACMKGCCCC
---TGACACCTGTCA-
 A C G T A T G C A C G T A C G T A C T G C G T A A G T C C G T A A G T C G T C A A C T G A C T G A T G C A G T C A T G C A G T C
A C G T A C G T A C G T G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A A C G T

PH0164.1_Six4/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--KCKTGACACMKGCCCC
ATAAATGACACCTATCA-
 A C G T A C G T A C G T A T G C A C G T A C G T A C T G C G T A A G T C C G T A A G T C G T C A A C T G A C T G A T G C A G T C A T G C A G T C
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:KCKTGACACMKGCCCC
--TTGACAGG------
 A C G T A T G C A C G T A C G T A C T G C G T A A G T C C G T A A G T C G T C A A C T G A C T G A T G C A G T C A T G C A G T C
A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:KCKTGACACMKGCCCC
---TGACAGCTGTCA-
 A C G T A T G C A C G T A C G T A C T G C G T A A G T C C G T A A G T C G T C A A C T G A C T G A T G C A G T C A T G C A G T C
A C G T A C G T A C G T G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:KCKTGACACMKGCCCC
---TGACACCT-----
 A C G T A T G C A C G T A C G T A C T G C G T A A G T C C G T A A G T C G T C A A C T G A C T G A T G C A G T C A T G C A G T C
A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:forward strand
Alignment:KCKTGACACMKGCCCC
----GACACGTGCC--
 A C G T A T G C A C G T A C G T A C T G C G T A A G T C C G T A A G T C G T C A A C T G A C T G A T G C A G T C A T G C A G T C
A C G T A C G T A C G T A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C A C G T A C G T