Information for 4-TTTYAAAAASMAAGTA (Motif 9)

A C G T A C G T A C G T G A C T C G T A C G T A C G T A C G T A C G T A A T G C G T A C C G T A C T G A C A T G C G A T G C T A
Reverse Opposite:
C G A T C G T A G A T C A G C T A C G T C A T G T A C G C G A T C G A T A C G T A C G T A C G T C T G A C G T A C G T A C G T A
p-value:1e-11
log p-value:-2.656e+01
Information Content per bp:1.760
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif13.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets45.2 +/- 22.0bp
Average Position of motif in Background49.4 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TTTYAAAAASMAAGTA
CGGTTTCAAA---------
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A C G T A C G T A C G T A C G T A A T G C G T A C C G T A C T G A C A T G C G A T G C T A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTTYAAAAASMAAGTA
NATTCAAAT--------
 A C G T A C G T A C G T A C G T G A C T C G T A C G T A C G T A C G T A C G T A A T G C G T A C C G T A C T G A C A T G C G A T G C T A
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTTYAAAAASMAAGTA
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T A C G T G A C T C G T A C G T A C G T A C G T A C G T A A T G C G T A C C G T A C T G A C A T G C G A T G C T A
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTTYAAAAASMAAGTA-
GTTCAAAAAAAAAATTC
 A C G T A C G T A C G T G A C T C G T A C G T A C G T A C G T A C G T A A T G C G T A C C G T A C T G A C A T G C G A T G C T A A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PB0145.1_Mafb_2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTTYAAAAASMAAGTA
CAATTGCAAAAATAT----
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A C G T A C G T A C G T A C G T A A T G C G T A C C G T A C T G A C A T G C G A T G C T A
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTTYAAAAASMAAGTA
-AACAAACAACAAGAG
 A C G T A C G T A C G T G A C T C G T A C G T A C G T A C G T A C G T A A T G C G T A C C G T A C T G A C A T G C G A T G C T A
A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0187.1_Tcf7_2/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TTTYAAAAASMAAGTA
CCGTATTATAAACAA----
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A C G T A C G T A C G T A C G T A A T G C G T A C C G T A C T G A C A T G C G A T G C T A
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A A C G T A C G T A C G T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTTYAAAAASMAAGTA
BAGTCATANTGAAAG--
 A C G T A C G T A C G T A C G T G A C T C G T A C G T A C G T A C G T A C G T A A T G C G T A C C G T A C T G A C A T G C G A T G C T A
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTTYAAAAASMAAGTA
WNAGTCADAVTGAAACTN
 A C G T A C G T A C G T A C G T A C G T G A C T C G T A C G T A C G T A C G T A C G T A A T G C G T A C C G T A C T G A C A T G C G A T G C T A
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TTTYAAAAASMAAGTA
---GAAAGTGAAAGT-
 A C G T A C G T A C G T G A C T C G T A C G T A C G T A C G T A C G T A A T G C G T A C C G T A C T G A C A T G C G A T G C T A
A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T