Information for 18-GGCAAAGCTT (Motif 14)

C A T G T C A G T A G C C T G A C G T A C T G A A C T G G A T C A C G T A G C T
Reverse Opposite:
C T G A C G T A C A T G G T A C A G C T A C G T A G C T A T C G A G T C G T A C
p-value:1e-43
log p-value:-9.957e+01
Information Content per bp:1.774
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif10.74%
Number of Background Sequences with motif95.2
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets45.5 +/- 27.0bp
Average Position of motif in Background53.6 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.84
Offset:4
Orientation:reverse strand
Alignment:GGCAAAGCTT-
----AAGCTTG
 C A T G T C A G T A G C C T G A C G T A C T G A A C T G G A T C A C G T A G C T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGCAAAGCTT-
ANGNAAAGGTCA
 A C G T C A T G T C A G T A G C C T G A C G T A C T G A A C T G G A T C A C G T A G C T A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGCAAAGCTT-
TGGGGCAAAGGTCA
 A C G T A C G T A C G T C A T G T C A G T A G C C T G A C G T A C T G A A C T G G A T C A C G T A G C T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PB0161.1_Rxra_2/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGCAAAGCTT-----
TCGCGAAGGTTGTACT
 A C G T C A T G T C A G T A G C C T G A C G T A C T G A A C T G G A T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGCAAAGCTT-
TAGGGCAAAGGTCA
 A C G T A C G T A C G T C A T G T C A G T A G C C T G A C G T A C T G A A C T G G A T C A C G T A G C T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GGCAAAGCTT-
GTAGGGCAAAGGTCA
 A C G T A C G T A C G T A C G T C A T G T C A G T A G C C T G A C G T A C T G A A C T G G A T C A C G T A G C T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGCAAAGCTT
TGGAAAA----
 A C G T C A T G T C A G T A G C C T G A C G T A C T G A A C T G G A T C A C G T A G C T
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGCAAAGCTT
-----NGCTN
 C A T G T C A G T A G C C T G A C G T A C T G A A C T G G A T C A C G T A G C T
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

Nr2f6/MA0677.1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GGCAAAGCTT-
GAGGTCAAAGGTCA
 A C G T A C G T A C G T C A T G T C A G T A G C C T G A C G T A C T G A A C T G G A T C A C G T A G C T A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GGCAAAGCTT
NATGGAAAAN---
 A C G T A C G T A C G T C A T G T C A G T A G C C T G A C G T A C T G A A C T G G A T C A C G T A G C T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T