Information for 5-GATTGGCCGA (Motif 7)

A C T G C G T A A C G T A C G T A C T G A C T G A G T C G T A C A C T G C T G A
Reverse Opposite:
A G C T T G A C C A T G C T A G A G T C A G T C C G T A C G T A A C G T T A G C
p-value:1e-10
log p-value:-2.401e+01
Information Content per bp:1.849
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif35.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets63.5 +/- 25.7bp
Average Position of motif in Background42.6 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGCCGA
CCGATTGGCT--
 A C G T A C G T A C T G C G T A A C G T A C G T A C T G A C T G A G T C G T A C A C T G C T G A
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGCCGA---
CTGATTGGTCNATTT
 A C G T A C G T A C T G C G T A A C G T A C G T A C T G A C T G A G T C G T A C A C T G C T G A A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-GATTGGCCGA-
TGATTGGCTANN
 A C G T A C T G C G T A A C G T A C G T A C T G A C T G A G T C G T A C A C T G C T G A A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.75
Offset:-8
Orientation:forward strand
Alignment:--------GATTGGCCGA
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C T G A C T G A G T C G T A C A C T G C T G A
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.72
Offset:2
Orientation:forward strand
Alignment:GATTGGCCGA
--TTGGCA--
 A C T G C G T A A C G T A C G T A C T G A C T G A G T C G T A C A C T G C T G A
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GATTGGCCGA
-NTTGGCANN
 A C T G C G T A A C G T A C G T A C T G A C T G A G T C G T A C A C T G C T G A
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGCCGA
TTGATTGN----
 A C G T A C G T A C T G C G T A A C G T A C G T A C T G A C T G A G T C G T A C A C T G C T G A
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GATTGGCCGA
NNTTGGCANN
 A C T G C G T A A C G T A C G T A C T G A C T G A G T C G T A C A C T G C T G A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Gfi1/MA0038.1/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GATTGGCCGA
CNGTGATTTN----
 A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C T G A C T G A G T C G T A C A C T G C T G A
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGCCGA
BTGABTGACAGS
 A C G T A C G T A C T G C G T A A C G T A C G T A C T G A C T G A G T C G T A C A C T G C T G A
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C