Information for 3-GAGRAAGGCTTTGAWM (Motif 3)

A T C G C G T A A T C G T C G A G T C A C G T A C T A G A C T G A G T C C G A T A C G T A C G T A T C G C G T A C G T A T G A C
Reverse Opposite:
A C G T C G A T A C G T A T G C C G T A T G C A C G T A A C T G T A G C A G T C A C G T A C G T A G C T A T G C A C G T A T G C
p-value:1e-16
log p-value:-3.813e+01
Information Content per bp:1.772
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.1 +/- 19.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:GAGRAAGGCTTTGAWM-
-------CCTTTGATGT
 A T C G C G T A A T C G T C G A G T C A C G T A C T A G A C T G A G T C C G A T A C G T A C G T A T C G C G T A C G T A T G A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

TCF7L2/MA0523.1/Jaspar

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GAGRAAGGCTTTGAWM---
-----TNCCTTTGATCTTN
 A T C G C G T A A T C G T C G A G T C A C G T A C T A G A C T G A G T C C G A T A C G T A C G T A T C G C G T A C G T A T G A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:3
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GAGRAAGGCTTTGAWM-
-----TNCCTTTGATGT
 A T C G C G T A A T C G T C G A G T C A C G T A C T A G A C T G A G T C C G A T A C G T A C G T A T C G C G T A C G T A T G A C A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

PB0040.1_Lef1_1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GAGRAAGGCTTTGAWM----
---AATCCCTTTGATCTATC
 A T C G C G T A A T C G T C G A G T C A C G T A C T A G A C T G A G T C C G A T A C G T A C G T A T C G C G T A C G T A T G A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GAGRAAGGCTTTGAWM----
---ATTTCCTTTGATCTATA
 A T C G C G T A A T C G T C G A G T C A C G T A C T A G A C T G A G T C C G A T A C G T A C G T A T C G C G T A C G T A T G A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GAGRAAGGCTTTGAWM----
---NNTTCCTTTGATCTANA
 A T C G C G T A A T C G T C G A G T C A C G T A C T A G A C T G A G T C C G A T A C G T A C G T A T C G C G T A C G T A T G A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:7
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GAGRAAGGCTTTGAWM-
-------CCTTTGAWGT
 A T C G C G T A A T C G T C G A G T C A C G T A C T A G A C T G A G T C C G A T A C G T A C G T A T C G C G T A C G T A T G A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

LEF1/MA0768.1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GAGRAAGGCTTTGAWM---
----AACCCTTTGATCTTT
 A T C G C G T A A T C G T C G A G T C A C G T A C T A G A C T G A G T C C G A T A C G T A C G T A T C G C G T A C G T A T G A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

Tcf7/MA0769.1/Jaspar

Match Rank:9
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:GAGRAAGGCTTTGAWM---
-------CCTTTGATCTTT
 A T C G C G T A A T C G T C G A G T C A C G T A C T A G A C T G A G T C C G A T A C G T A C G T A T C G C G T A C G T A T G A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GAGRAAGGCTTTGAWM----
---NNTTCCTTTGATCTNNA
 A T C G C G T A A T C G T C G A G T C A C G T A C T A G A C T G A G T C C G A T A C G T A C G T A T C G C G T A C G T A T G A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A