Information for 5-CTGCTTTGAAAAG (Motif 10)

A G T C A C G T A C T G A G T C A G C T A C G T G A C T A T C G C G T A C G T A C G T A C T G A A C T G
Reverse Opposite:
A G T C A G C T A C G T A C G T A C G T A T G C C T G A C G T A C T G A A C T G A G T C C G T A A C T G
p-value:1e-8
log p-value:-1.941e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets71.4 +/- 18.3bp
Average Position of motif in Background54.9 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT3/MA0144.2/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGCTTTGAAAAG
CTTCTGGGAAA--
 A G T C A C G T A C T G A G T C A G C T A C G T G A C T A T C G C G T A C G T A C G T A C T G A A C T G
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTGCTTTGAAAAG-
----TTTGAAACCG
 A G T C A C G T A C T G A G T C A G C T A C G T G A C T A T C G C G T A C G T A C G T A C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTGCTTTGAAAAG
--CCTTTGATGT-
 A G T C A C G T A C T G A G T C A G C T A C G T G A C T A T C G C G T A C G T A C G T A C T G A A C T G
A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGCTTTGAAAAG
-TTCTTGGAAAN-
 A G T C A C G T A C T G A G T C A G C T A C G T G A C T A T C G C G T A C G T A C G T A C T G A A C T G
A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CTGCTTTGAAAAG
-----TGGAAAA-
 A G T C A C G T A C T G A G T C A G C T A C G T G A C T A T C G C G T A C G T A C G T A C T G A A C T G
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTGCTTTGAAAAG-
--GNCTATAAAAGG
 A G T C A C G T A C T G A G T C A G C T A C G T G A C T A T C G C G T A C G T A C G T A C T G A A C T G A C G T
A C G T A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTGCTTTGAAAAG
---NATGGAAAAN
 A G T C A C G T A C T G A G T C A G C T A C G T G A C T A T C G C G T A C G T A C G T A C T G A A C T G
A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTGCTTTGAAAAG
NTTTCTNAGAAA--
 A C G T A G T C A C G T A C T G A G T C A G C T A C G T G A C T A T C G C G T A C G T A C G T A C T G A A C T G
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTGCTTTGAAAAG-
TTTCCAGGAAATGG
 A G T C A C G T A C T G A G T C A G C T A C G T G A C T A T C G C G T A C G T A C G T A C T G A A C T G A C G T
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTGCTTTGAAAAG
---ATTTGAATT-
 A G T C A C G T A C T G A G T C A G C T A C G T G A C T A T C G C G T A C G T A C G T A C T G A A C T G
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T