Information for 9-GAATGGACTTCAA (Motif 18)

A C T G C T G A C T G A C A G T A C T G A C T G C G T A G T A C A C G T A C G T A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G C G T A C G T A A C T G A C G T A G T C A G T C G C T A A G C T A G C T A G T C
p-value:1e-9
log p-value:-2.174e+01
Information Content per bp:1.885
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.4 +/- 21.9bp
Average Position of motif in Background65.2 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAATGGACTTCAA--
NNATTGGACTTTNGNN
 A C G T A C T G C T G A C T G A C A G T A C T G A C T G C G T A G T A C A C G T A C G T A G T C C G T A C G T A A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:2
Score:0.61
Offset:6
Orientation:forward strand
Alignment:GAATGGACTTCAA---
------ACWTCAAAGG
 A C T G C T G A C T G A C A G T A C T G A C T G C G T A G T A C A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

PB0169.1_Sox15_2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAATGGACTTCAA
TTGAATGAAATTCGA
 A C G T A C G T A C T G C T G A C T G A C A G T A C T G A C T G C G T A G T A C A C G T A C G T A G T C C G T A C G T A
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GAATGGACTTCAA---
------ACATCAAAGG
 A C T G C T G A C T G A C A G T A C T G A C T G C G T A G T A C A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GAATGGACTTCAA-
----CGGTTTCAAA
 A C T G C T G A C T G A C A G T A C T G A C T G C G T A G T A C A C G T A C G T A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAATGGACTTCAA-
AGAAATGACTTCCCT
 A C G T A C T G C T G A C T G A C A G T A C T G A C T G C G T A G T A C A C G T A C G T A G T C C G T A C G T A A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAATGGACTTCAA
-NCTGGAATGC--
 A C T G C T G A C T G A C A G T A C T G A C T G C G T A G T A C A C G T A C G T A G T C C G T A C G T A
A C G T G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAATGGACTTCAA--
TTTTAAGTACTTAAATT
 A C G T A C G T A C T G C T G A C T G A C A G T A C T G A C T G C G T A G T A C A C G T A C G T A G T C C G T A C G T A A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

PH0117.1_Nkx3-1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAATGGACTTCAA--
TACTAAGTACTTAAATG
 A C G T A C G T A C T G C T G A C T G A C A G T A C T G A C T G C G T A G T A C A C G T A C G T A G T C C G T A C G T A A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

PB0068.1_Sox1_1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAATGGACTTCAA-----
--AATCAATTCAATAATT
 A C T G C T G A C T G A C A G T A C T G A C T G C G T A G T A C A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T