Information for 5-GCTGCGGGTGGCGGTG (Motif 6)

A C T G A G T C A C G T A C T G A G T C C T A G A C T G A C T G A C G T A C T G A C T G A G T C A C T G A C T G A C G T A C T G
Reverse Opposite:
A G T C T G C A A G T C G T A C A C T G A G T C A G T C C G T A A G T C A G T C G A T C A C T G A G T C C G T A A C T G A G T C
p-value:1e-10
log p-value:-2.386e+01
Information Content per bp:1.944
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.2 +/- 25.6bp
Average Position of motif in Background17.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCTGCGGGTGGCGGTG----
---NAGANTGGCGGGGNGNA
 A C T G A G T C A C G T A C T G A G T C C T A G A C T G A C T G A C G T A C T G A C T G A G T C A C T G A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

GCM2/MA0767.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCTGCGGGTGGCGGTG
TATGCGGGTA------
 A C T G A G T C A C G T A C T G A G T C C T A G A C T G A C T G A C G T A C T G A C T G A G T C A C T G A C T G A C G T A C T G
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCTGCGGGTGGCGGTG
-SDGCAGGTGCNS---
 A C T G A G T C A C G T A C T G A G T C C T A G A C T G A C T G A C G T A C T G A C T G A G T C A C T G A C T G A C G T A C T G
A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCTGCGGGTGGCGGTG
NCNCAGCGGGGGGTC---
 A C G T A C G T A C T G A G T C A C G T A C T G A G T C C T A G A C T G A C T G A C G T A C T G A C T G A G T C A C T G A C T G A C G T A C T G
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCTGCGGGTGGCGGTG
NNNNATGCGGGTNNNN---
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G A G T C C T A G A C T G A C T G A C G T A C T G A C T G A G T C A C T G A C T G A C G T A C T G
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCTGCGGGTGGCGGTG
NCGCAGCGGGGGGTC---
 A C G T A C G T A C T G A G T C A C G T A C T G A G T C C T A G A C T G A C T G A C G T A C T G A C T G A G T C A C T G A C T G A C G T A C T G
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCTGCGGGTGGCGGTG-
--GGGNGGGGGCGGGGC
 A C T G A G T C A C G T A C T G A G T C C T A G A C T G A C T G A C G T A C T G A C T G A G T C A C T G A C T G A C G T A C T G A C G T
A C G T A C G T T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

GCM1/MA0646.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCTGCGGGTGGCGGTG
CATGCGGGTAC-----
 A C T G A G T C A C G T A C T G A G T C C T A G A C T G A C T G A C G T A C T G A C T G A G T C A C T G A C T G A C G T A C T G
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T A C G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GCTGCGGGTGGCGGTG-
------GGGGGCGGGGC
 A C T G A G T C A C G T A C T G A G T C C T A G A C T G A C T G A C G T A C T G A C T G A G T C A C T G A C T G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCTGCGGGTGGCGGTG
--TGGGTGTGGC----
 A C T G A G T C A C G T A C T G A G T C C T A G A C T G A C T G A C G T A C T G A C T G A G T C A C T G A C T G A C G T A C T G
A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T