Information for 4-TTTCACCTTGCTG (Motif 9)

A C G T A C G T A C G T G T A C C G T A A G T C A G T C A G C T A G C T A C T G A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A G T C C T G A C T G A A C T G A C T G C G A T A C T G C G T A C G T A C G T A
p-value:1e-11
log p-value:-2.637e+01
Information Content per bp:1.939
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.4 +/- 24.7bp
Average Position of motif in Background49.7 +/- 12.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TTTCACCTTGCTG--
---CCCCCTGCTGTG
 A C G T A C G T A C G T G T A C C G T A A G T C A G T C A G C T A G C T A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

ESRRB/MA0141.3/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTTCACCTTGCTG
NATGACCTTGA--
 A C G T A C G T A C G T G T A C C G T A A G T C A G T C A G C T A G C T A C T G A G T C A C G T A C T G
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTTCACCTTGCTG
ACTTTCACTTTC---
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A G T C A G T C A G C T A G C T A C T G A G T C A C G T A C T G
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTTCACCTTGCTG
-NTGACCTTGA--
 A C G T A C G T A C G T G T A C C G T A A G T C A G T C A G C T A G C T A C T G A G T C A C G T A C T G
A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TTTCACCTTGCTG---
------CCTGCTGAGH
 A C G T A C G T A C G T G T A C C G T A A G T C A G T C A G C T A G C T A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTTCACCTTGCTG
BNTGDCCTTG---
 A C G T A C G T A C G T G T A C C G T A A G T C A G T C A G C T A G C T A C T G A G T C A C G T A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTTCACCTTGCTG-
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A G T C A G T C A G C T A G C T A C T G A G T C A C G T A C T G A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTTCACCTTGCTG
-ATGACCTTGA--
 A C G T A C G T A C G T G T A C C G T A A G T C A G T C A G C T A G C T A C T G A G T C A C G T A C T G
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:9
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------TTTCACCTTGCTG
GTTTTGCTTTCACTTTCC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A G T C A G T C A G C T A G C T A C T G A G T C A C G T A C T G
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTTCACCTTGCTG
TCACTTTCACTTTCN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A G T C A G T C A G C T A G C T A C T G A G T C A C G T A C T G
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T A C G T A C G T