Information for 20-GACAATGACAAGAGCC (Motif 42)

A C T G C G T A A G T C C G T A C G T A A G C T A T C G C G T A A G T C C G T A G T C A A C T G C G T A A T C G A G T C A G T C
Reverse Opposite:
A C T G A C T G A T G C A C G T A G T C A C G T A C G T A C T G A C G T A T G C C T G A A C G T A C G T A C T G A C G T G T A C
p-value:1e-4
log p-value:-9.323e+00
Information Content per bp:1.920
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.7 +/- 21.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GACAATGACAAGAGCC
GACAATGNN-------
 A C T G C G T A A G T C C G T A C G T A A G C T A T C G C G T A A G T C C G T A G T C A A C T G C G T A A T C G A G T C A G T C
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GACAATGACAAGAGCC
VRRACAAWGG--------
 A C G T A C G T A C T G C G T A A G T C C G T A C G T A A G C T A T C G C G T A A G T C C G T A G T C A A C T G C G T A A T C G A G T C A G T C
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GACAATGACAAGAGCC
-ACAAAG---------
 A C T G C G T A A G T C C G T A C G T A A G C T A T C G C G T A A G T C C G T A G T C A A C T G C G T A A T C G A G T C A G T C
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GACAATGACAAGAGCC
AAAACAATGG--------
 A C G T A C G T A C T G C G T A A G T C C G T A C G T A A G C T A T C G C G T A A G T C C G T A G T C A A C T G C G T A A T C G A G T C A G T C
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GACAATGACAAGAGCC
RAACAATGGN-------
 A C G T A C T G C G T A A G T C C G T A C G T A A G C T A T C G C G T A A G T C C G T A G T C A A C T G C G T A A T C G A G T C A G T C
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GACAATGACAAGAGCC
----TTGACAG-----
 A C T G C G T A A G T C C G T A C G T A A G C T A T C G C G T A A G T C C G T A G T C A A C T G C G T A A T C G A G T C A G T C
A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GACAATGACAAGAGCC
RNAACAATGG--------
 A C G T A C G T A C T G C G T A A G T C C G T A C G T A A G C T A T C G C G T A A G T C C G T A G T C A A C T G C G T A A T C G A G T C A G T C
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GACAATGACAAGAGCC
AAAAATAACAAACGG-
 A C T G C G T A A G T C C G T A C G T A A G C T A T C G C G T A A G T C C G T A G T C A A C T G C G T A A T C G A G T C A G T C
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GACAATGACAAGAGCC
--CAAGGHCANV----
 A C T G C G T A A G T C C G T A C G T A A G C T A T C G C G T A A G T C C G T A G T C A A C T G C G T A A T C G A G T C A G T C
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GACAATGACAAGAGCC
VRAACAATGG--------
 A C G T A C G T A C T G C G T A A G T C C G T A C G T A A G C T A T C G C G T A A G T C C G T A G T C A A C T G C G T A A T C G A G T C A G T C
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T