Information for 19-CCCCTGGTGCATTAGC (Motif 41)

A T G C A T G C A T G C A G T C C G A T A C T G A C T G C G A T A T C G A G T C G T C A A G C T A G C T C G T A A C T G A G T C
Reverse Opposite:
C T A G A G T C A C G T C T G A C T G A C A G T A C T G A T G C C G T A A G T C A G T C C G T A A C T G A T C G A T C G A T C G
p-value:1e-4
log p-value:-9.323e+00
Information Content per bp:1.914
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.2 +/- 26.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT2/MA0744.1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTGGTGCATTAGC
CCACCTGTTGCAT----
 A C G T A T G C A T G C A T G C A G T C C G A T A C T G A C T G C G A T A T C G A G T C G T C A A G C T A G C T C G T A A C T G A G T C
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T A C G T A C G T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTGGTGCATTAGC
ANCCACCTGTTGCNC----
 A C G T A C G T A C G T A T G C A T G C A T G C A G T C C G A T A C T G A C T G C G A T A T C G A G T C G T C A A G C T A G C T C G T A A C T G A G T C
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTGGTGCATTAGC
TCCCCTGGGGAC-----
 A C G T A T G C A T G C A T G C A G T C C G A T A C T G A C T G C G A T A T C G A G T C G T C A A G C T A G C T C G T A A C T G A G T C
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCCCTGGTGCATTAGC
GAGCCCTTGTCCCTAA--
 A C G T A C G T A T G C A T G C A T G C A G T C C G A T A C T G A C T G C G A T A T C G A G T C G T C A A G C T A G C T C G T A A C T G A G T C
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCCCTGGTGCATTAGC
ATCCACAGGTGCGAAAA-
 A C G T A C G T A T G C A T G C A T G C A G T C C G A T A C T G A C T G C G A T A T C G A G T C G T C A A G C T A G C T C G T A A C T G A G T C
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A A C G T

PH0015.1_Crx/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CCCCTGGTGCATTAGC--
--CGTTGGGGATTAGCCT
 A T G C A T G C A T G C A G T C C G A T A C T G A C T G C G A T A T C G A G T C G T C A A G C T A G C T C G T A A C T G A G T C A C G T A C G T
A C G T A C G T A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.53
Offset:-9
Orientation:forward strand
Alignment:---------CCCCTGGTGCATTAGC
CNNBRGCGCCCCCTGSTGGC-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A T G C A T G C A G T C C G A T A C T G A C T G C G A T A T C G A G T C G T C A A G C T A G C T C G T A A C T G A G T C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CCCCTGGTGCATTAGC
-NNCAGGTGCG-----
 A T G C A T G C A T G C A G T C C G A T A C T G A C T G C G A T A T C G A G T C G T C A A G C T A G C T C G T A A C T G A G T C
A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCCCTGGTGCATTAGC
-GACAGGTGTN-----
 A T G C A T G C A T G C A G T C C G A T A C T G A C T G C G A T A T C G A G T C G T C A A G C T A G C T C G T A A C T G A G T C
A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T A C G T A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CCCCTGGTGCATTAGC----
----AGGGGGATTAGCTGCC
 A T G C A T G C A T G C A G T C C G A T A C T G A C T G C G A T A T C G A G T C G T C A A G C T A G C T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C