Information for 2-AAGKAAAGAGCAATAG (Motif 2)

C T G A C T G A T A C G A C G T T C G A T C G A C G T A A T C G C T G A A C T G G T A C G T C A C T G A G A C T C G T A A C T G
Reverse Opposite:
A G T C C G A T C T G A A G C T A C G T A C T G A G T C A G C T A T G C C G A T A G C T A G C T T G C A A G T C G A C T G A C T
p-value:1e-16
log p-value:-3.759e+01
Information Content per bp:1.704
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif8.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.3 +/- 25.9bp
Average Position of motif in Background72.1 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0073.1_Sox7_1/Jaspar

Match Rank:1
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AAGKAAAGAGCAATAG-------
-AATAAAGAACAATAGAATTTCA
 C T G A C T G A T A C G A C G T T C G A T C G A C G T A A T C G C T G A A C T G G T A C G T C A C T G A G A C T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

SCRT2/MA0744.1/Jaspar

Match Rank:2
Score:0.54
Offset:7
Orientation:forward strand
Alignment:AAGKAAAGAGCAATAG----
-------ATGCAACAGGTGG
 C T G A C T G A T A C G A C G T T C G A T C G A C G T A A T C G C T G A A C T G G T A C G T C A C T G A G A C T C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

SCRT1/MA0743.1/Jaspar

Match Rank:3
Score:0.54
Offset:7
Orientation:forward strand
Alignment:AAGKAAAGAGCAATAG------
-------GAGCAACAGGTGGTT
 C T G A C T G A T A C G A C G T T C G A T C G A C G T A A T C G C T G A A C T G G T A C G T C A C T G A G A C T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.53
Offset:7
Orientation:forward strand
Alignment:AAGKAAAGAGCAATAG
-------CAGCC----
 C T G A C T G A T A C G A C G T T C G A T C G A C G T A A T C G C T G A A C T G G T A C G T C A C T G A G A C T C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:5
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:AAGKAAAGAGCAATAG
-------GAACAATGG
 C T G A C T G A T A C G A C G T T C G A T C G A C G T A A T C G C T G A A C T G G T A C G T C A C T G A G A C T C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G

PB0065.1_Sox15_1/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AAGKAAAGAGCAATAG----
---TAGTGAACAATAGATTT
 C T G A C T G A T A C G A C G T T C G A T C G A C G T A A T C G C T G A A C T G G T A C G T C A C T G A G A C T C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AAGKAAAGAGCAATAG------
RGGCAMTAGGGAGCCATRGAAGGTK
 A C G T A C G T A C G T C T G A C T G A T A C G A C G T T C G A T C G A C G T A A T C G C T G A A C T G G T A C G T C A C T G A G A C T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AAGKAAAGAGCAATAG----
---TNNAGAACAATANATNN
 C T G A C T G A T A C G A C G T T C G A T C G A C G T A A T C G C T G A A C T G G T A C G T C A C T G A G A C T C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:AAGKAAAGAGCAATAG-
-------GAACAATGGN
 C T G A C T G A T A C G A C G T T C G A T C G A C G T A A T C G C T G A A C T G G T A C G T C A C T G A G A C T C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

PB0072.1_Sox5_1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:AAGKAAAGAGCAATAG---
---TTTAGAACAATAAAAT
 C T G A C T G A T A C G A C G T T C G A T C G A C G T A A T C G C T G A A C T G G T A C G T C A C T G A G A C T C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T