Information for 7-GCATGATACC (Motif 25)

A C T G A G T C C G T A A C G T A C T G C G T A A C G T C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T C G T A A C G T A G T C C G T A A C G T A C T G A G T C
p-value:1e-5
log p-value:-1.272e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.7 +/- 19.0bp
Average Position of motif in Background91.9 +/- 1.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0161.1_Six1/Jaspar

Match Rank:1
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--GCATGATACC-----
ANNNATGATACCCCATC
 A C G T A C G T A C T G A G T C C G T A A C G T A C T G C G T A A C G T C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

PH0164.1_Six4/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--GCATGATACC-----
ATAAATGACACCTATCA
 A C G T A C G T A C T G A G T C C G T A A C G T A C T G C G T A A C G T C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

PB0059.1_Six6_1/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GCATGATACC-----
ANANNTGATACCCNATN
 A C G T A C G T A C T G A G T C C G T A A C G T A C T G C G T A A C G T C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

PH0166.1_Six6_2/Jaspar

Match Rank:4
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GCATGATACC-----
AATNTTGATACCCTATN
 A C G T A C G T A C T G A G T C C G T A A C G T A C T G C G T A A C G T C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

PH0162.1_Six2/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GCATGATACC-----
ANANGTGATACCCCATT
 A C G T A C G T A C T G A G T C C G T A A C G T A C T G C G T A A C G T C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

PH0165.1_Six6_1/Jaspar

Match Rank:6
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GCATGATACC-----
ANANNTGATACCCTATN
 A C G T A C G T A C T G A G T C C G T A A C G T A C T G C G T A A C G T C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T

Six3/MA0631.1/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GCATGATACC-----
ANANGTGATACCCTATN
 A C G T A C G T A C T G A G T C C G T A A C G T A C T G C G T A A C G T C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0163.1_Six3/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GCATGATACC-----
ANANGTGATACCCTATN
 A C G T A C G T A C T G A G T C C G T A A C G T A C T G C G T A A C G T C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

DMRT3/MA0610.1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCATGATACC--
-NTTGATACATT
 A C T G A G T C C G T A A C G T A C T G C G T A A C G T C G T A A G T C A G T C A C G T A C G T
A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCATGATACC-
-ACTGAAACCA
 A C T G A G T C C G T A A C G T A C T G C G T A A C G T C G T A A G T C A G T C A C G T
A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A