Information for 5-CCGCTCGGAG (Motif 29)

T A G C A T G C A C T G A G T C C G A T A G T C T A C G A C T G C T G A A C T G
Reverse Opposite:
A G T C A G C T A G T C A T G C C T A G C G T A A C T G G T A C T A C G A T C G
p-value:1e-7
log p-value:-1.812e+01
Information Content per bp:1.843
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif136.6
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets53.0 +/- 25.7bp
Average Position of motif in Background47.4 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CCGCTCGGAG-
-----CGGAGC
 T A G C A T G C A C T G A G T C C G A T A G T C T A C G A C T G C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCGCTCGGAG
-NGCTN----
 T A G C A T G C A C T G A G T C C G A T A G T C T A C G A C T G C T G A A C T G
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCGCTCGGAG--
--GCTCGGSCTC
 T A G C A T G C A C T G A G T C C G A T A G T C T A C G A C T G C T G A A C T G A C G T A C G T
A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCGCTCGGAG---
GCCGCGCAGTGCGT
 A C G T T A G C A T G C A C T G A G T C C G A T A G T C T A C G A C T G C T G A A C T G A C G T A C G T A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

PB0114.1_Egr1_2/Jaspar

Match Rank:5
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------CCGCTCGGAG
NNAGTCCCACTCNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T T A G C A T G C A C T G A G T C C G A T A G T C T A C G A C T G C T G A A C T G
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

POL001.1_MTE/Jaspar

Match Rank:6
Score:0.51
Offset:-9
Orientation:reverse strand
Alignment:---------CCGCTCGGAG
NCGACCGCTCCGCTCGAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A T G C A C T G A G T C C G A T A G T C T A C G A C T G C T G A A C T G
T C A G A T G C C T A G C G T A A T G C A G T C A C T G G A C T A C G T A T G C A T G C A C T G A G T C A C G T A G T C A C T G C T G A C T G A T C G A

PB0103.1_Zic3_1/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CCGCTCGGAG---
NCCCCCCCGGGGGGN
 A C G T A C G T T A G C A T G C A C T G A G T C C G A T A G T C T A C G A C T G C T G A A C T G A C G T A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CCGCTCGGAG---
ACCCCCCCGGGGGGN
 A C G T A C G T T A G C A T G C A C T G A G T C C G A T A G T C T A C G A C T G C T G A A C T G A C G T A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CCGCTCGGAG--
ACCACTCTCGGTCAC
 A C G T A C G T A C G T T A G C A T G C A C T G A G T C C G A T A G T C T A C G A C T G C T G A A C T G A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PB0101.1_Zic1_1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CCGCTCGGAG---
CCCCCCCGGGGGNN
 A C G T T A G C A T G C A C T G A G T C C G A T A G T C T A C G A C T G C T G A A C T G A C G T A C G T A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G