p-value: | 1e-8 |
log p-value: | -1.846e+01 |
Information Content per bp: | 1.749 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 1.04% |
Number of Background Sequences with motif | 18.7 |
Percentage of Background Sequences with motif | 0.04% |
Average Position of motif in Targets | 52.1 +/- 31.2bp |
Average Position of motif in Background | 45.4 +/- 22.5bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Nr2f6/MA0677.1/Jaspar
Match Rank: | 1 |
Score: | 0.53 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GTGTAARGTCTKT GAGGTCAAAGGTCA-- |
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Rxra/MA0512.2/Jaspar
Match Rank: | 2 |
Score: | 0.53 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GTGTAARGTCTKT GGGGTCAAAGGTCA-- |
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RXRB/MA0855.1/Jaspar
Match Rank: | 3 |
Score: | 0.52 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GTGTAARGTCTKT GGGGTCAAAGGTCA-- |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 4 |
Score: | 0.52 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GTGTAARGTCTKT----- -NNTNNTGTCTGGNNTNG |
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RXRG/MA0856.1/Jaspar
Match Rank: | 5 |
Score: | 0.52 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GTGTAARGTCTKT GGGGTCAAAGGTCA-- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 6 |
Score: | 0.51 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GTGTAARGTCTKT ---VBSYGTCTGG |
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PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer
Match Rank: | 7 |
Score: | 0.51 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTGTAARGTCTKT-- VAGRACAKNCTGTBC |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 8 |
Score: | 0.50 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GTGTAARGTCTKT -----TWGTCTGV |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 9 |
Score: | 0.49 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GTGTAARGTCTKT -----CTGTCTGG |
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GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer
Match Rank: | 10 |
Score: | 0.49 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTGTAARGTCTKT-- VAGRACAKWCTGTYC |
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