Information for 15-TGGGGGBTGCACTGAG (Motif 19)

A G C T A C T G A C T G C T A G C T A G T C A G A T C G C G A T A T C G T G A C G C T A T A G C A C G T C A T G C G T A A C T G
Reverse Opposite:
A G T C C G A T G T A C T C G A A T C G C G A T A C T G A T G C C G T A T A G C A G T C G A T C A G T C A G T C A G T C C T G A
p-value:1e-9
log p-value:-2.273e+01
Information Content per bp:1.771
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.3 +/- 22.7bp
Average Position of motif in Background56.7 +/- 3.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFKB1/MA0105.4/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGGGGGBTGCACTGAG
AGGGGATTCCCCT---
 A G C T A C T G A C T G C T A G C T A G T C A G A T C G C G A T A T C G T G A C G C T A T A G C A C G T C A T G C G T A A C T G
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGGGGGBTGCACTGAG
AGGGGATTCCCCT---
 A G C T A C T G A C T G C T A G C T A G T C A G A T C G C G A T A T C G T G A C G C T A T A G C A C G T C A T G C G T A A C T G
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T A C G T A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGGGGGBTGCACTGAG
-GGGAATTGTAGT---
 A G C T A C T G A C T G C T A G C T A G T C A G A T C G C G A T A T C G T G A C G C T A T A G C A C G T C A T G C G T A A C T G
A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGGGGGBTGCACTGAG
GCTGGGGGGTACCCCTT-
 A C G T A C G T A G C T A C T G A C T G C T A G C T A G T C A G A T C G C G A T A T C G T G A C G C T A T A G C A C G T C A T G C G T A A C T G
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGGGGGBTGCACTGAG
-GGGGATTCCCCC---
 A G C T A C T G A C T G C T A G C T A G T C A G A T C G C G A T A T C G T G A C G C T A T A G C A C G T C A T G C G T A A C T G
A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T A C G T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TGGGGGBTGCACTGAG
NTNTGGGGGGTCNNNA---
 A C G T A C G T A C G T A G C T A C T G A C T G C T A G C T A G T C A G A T C G C G A T A T C G T G A C G C T A T A G C A C G T C A T G C G T A A C T G
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGGGGGBTGCACTGAG
TGGGGA----------
 A G C T A C T G A C T G C T A G C T A G T C A G A T C G C G A T A T C G T G A C G C T A T A G C A C G T C A T G C G T A A C T G
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:8
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------TGGGGGBTGCACTGAG
GCMTBCTGGGAGTTGTAGTY--
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G A C T G C T A G C T A G T C A G A T C G C G A T A T C G T G A C G C T A T A G C A C G T C A T G C G T A A C T G
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C A C G T A C G T

GLIS3/MA0737.1/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TGGGGGBTGCACTGAG
CTTCGTGGGGGGTC-------
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G A C T G C T A G C T A G T C A G A T C G C G A T A T C G T G A C G C T A T A G C A C G T C A T G C G T A A C T G
T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TGGGGGBTGCACTGAG
CTTCGCGGGGGGTC-------
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G A C T G C T A G C T A G T C A G A T C G C G A T A T C G T G A C G C T A T A G C A C G T C A T G C G T A A C T G
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T