Information for 9-TGCGGGGCAGCCC (Motif 11)

A C G T A T C G G A T C A C T G A C T G A C T G A C T G A G T C C G T A A C T G A G T C A G T C A T G C
Reverse Opposite:
A T C G A C T G A C T G A G T C A C G T A C T G A G T C A G T C A G T C A G T C C T A G A T G C C G T A
p-value:1e-9
log p-value:-2.165e+01
Information Content per bp:1.943
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.2 +/- 30.0bp
Average Position of motif in Background78.4 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0110.1_Bcl6b_2/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGCGGGGCAGCCC-
NNTNAGGGGCGGNNNN
 A C G T A C G T A C G T A T C G G A T C A C T G A C T G A C T G A C T G A G T C C G T A A C T G A G T C A G T C A T G C A C G T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

NFKB2/MA0778.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGCGGGGCAGCCC--
--AGGGGAATCCCCT
 A C G T A T C G G A T C A C T G A C T G A C T G A C T G A G T C C G T A A C T G A G T C A G T C A T G C A C G T A C G T
A C G T A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGCGGGGCAGCCC-
--GGGGGAATCCCC
 A C G T A T C G G A T C A C T G A C T G A C T G A C T G A G T C C G T A A C T G A G T C A G T C A T G C A C G T
A C G T A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

PB0202.1_Zfp410_2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGCGGGGCAGCCC--
NNTNNGGGGCGGNGNGN
 A C G T A C G T A C G T A T C G G A T C A C T G A C T G A C T G A C T G A G T C C G T A A C T G A G T C A G T C A T G C A C G T A C G T
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

NFKB1/MA0105.4/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGCGGGGCAGCCC--
--AGGGGATTCCCCT
 A C G T A T C G G A T C A C T G A C T G A C T G A C T G A G T C C G T A A C T G A G T C A G T C A T G C A C G T A C G T
A C G T A C G T T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGCGGGGCAGCCC-
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A T C G G A T C A C T G A C T G A C T G A C T G A G T C C G T A A C T G A G T C A G T C A T G C A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGCGGGGCAGCCC----
-TTGGGGGCGCCCCTAG
 A C G T A T C G G A T C A C T G A C T G A C T G A C T G A G T C C G T A A C T G A G T C A G T C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGCGGGGCAGCCC
TGAGTGACAGSC-
 A C G T A T C G G A T C A C T G A C T G A C T G A C T G A G T C C G T A A C T G A G T C A G T C A T G C
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGCGGGGCAGCCC
WDNCTGGGCA----
 A C G T A C G T A T C G G A T C A C T G A C T G A C T G A C T G A G T C C G T A A C T G A G T C A G T C A T G C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGCGGGGCAGCCC
TGCGTGGGYG---
 A C G T A T C G G A T C A C T G A C T G A C T G A C T G A G T C C G T A A C T G A G T C A G T C A T G C
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T