Information for 4-GAYTTWTGGACWM (Motif 5)

A T C G G T C A A G T C A C G T C G A T C G A T A C G T A C T G A C T G C G T A A G T C C G A T G T A C
Reverse Opposite:
A C T G C G T A A C T G A C G T A G T C A G T C C G T A C G T A C G T A C G T A C T A G A C G T A T G C
p-value:1e-16
log p-value:-3.742e+01
Information Content per bp:1.873
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.3 +/- 14.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GAYTTWTGGACWM
TGATTTATGGCC--
 A C G T A T C G G T C A A G T C A C G T C G A T C G A T A C G T A C T G A C T G C G T A A G T C C G A T G T A C
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GAYTTWTGGACWM
NTGATTTATGGCC--
 A C G T A C G T A T C G G T C A A G T C A C G T C G A T C G A T A C G T A C T G A C T G C G T A A G T C C G A T G T A C
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GAYTTWTGGACWM
TGATTTATGGCC--
 A C G T A T C G G T C A A G T C A C G T C G A T C G A T A C G T A C T G A C T G C G T A A G T C C G A T G T A C
C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GAYTTWTGGACWM
TGATTTATGGC---
 A C G T A T C G G T C A A G T C A C G T C G A T C G A T A C G T A C T G A C T G C G T A A G T C C G A T G T A C
C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GAYTTWTGGACWM
TTGACTTTT------
 A C G T A C G T A T C G G T C A A G T C A C G T C G A T C G A T A C G T A C T G A C T G C G T A A G T C C G A T G T A C
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GAYTTWTGGACWM-
TGGACTTTGNNCTCN
 A C G T A T C G G T C A A G T C A C G T C G A T C G A T A C G T A C T G A C T G C G T A A G T C C G A T G T A C A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAYTTWTGGACWM-----
--NNATTGGACTTTNGNN
 A T C G G T C A A G T C A C G T C G A T C G A T A C G T A C T G A C T G C G T A A G T C C G A T G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAYTTWTGGACWM
TGATTGATGA----
 A C G T A T C G G T C A A G T C A C G T C G A T C G A T A C G T A C T G A C T G C G T A A G T C C G A T G T A C
C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T A C G T A C G T A C G T

PB0197.1_Zfp105_2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GAYTTWTGGACWM--
NAAANTTATTGAANCAN
 A C G T A C G T A T C G G T C A A G T C A C G T C G A T C G A T A C G T A C T G A C T G C G T A A G T C C G A T G T A C A C G T A C G T
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAYTTWTGGACWM
GCTATTTTTGGM---
 A C G T A C G T A T C G G T C A A G T C A C G T C G A T C G A T A C G T A C T G A C T G C G T A A G T C C G A T G T A C
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C A C G T A C G T A C G T