Information for 18-GAAACTATTCVCTAGH (Motif 27)

A C T G C G T A C G T A C T G A T A G C A G C T C G T A C G A T A C G T G T A C T C G A A T G C C A G T C T G A C T A G G C T A
Reverse Opposite:
C A G T A G T C A G C T G T C A T A C G A C G T A C T G C G T A C G T A A C G T C T G A A T C G A G C T A C G T C G A T A G T C
p-value:1e-8
log p-value:-1.968e+01
Information Content per bp:1.783
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.5 +/- 21.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GAAACTATTCVCTAGH
--AATTATT-------
 A C T G C G T A C G T A C T G A T A G C A G C T C G T A C G A T A C G T G T A C T C G A A T G C C A G T C T G A C T A G G C T A
A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAAACTATTCVCTAGH
ACTGAAACCA---------
 A C G T A C G T A C G T A C T G C G T A C G T A C T G A T A G C A G C T C G T A C G A T A C G T G T A C T C G A A T G C C A G T C T G A C T A G G C T A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GAAACTATTCVCTAGH
-AAACMATTAN-----
 A C T G C G T A C G T A C T G A T A G C A G C T C G T A C G A T A C G T G T A C T C G A A T G C C A G T C T G A C T A G G C T A
A C G T T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GAAACTATTCVCTAGH
-NAACAAT--------
 A C T G C G T A C G T A C T G A T A G C A G C T C G T A C G A T A C G T G T A C T C G A A T G C C A G T C T G A C T A G G C T A
A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:5
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GAAACTATTCVCTAGH-
-------TTCCKNAGAA
 A C T G C G T A C G T A C T G A T A G C A G C T C G T A C G A T A C G T G T A C T C G A A T G C C A G T C T G A C T A G G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A

PB0165.1_Sox11_2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GAAACTATTCVCTAGH
NNCNNAACAATTNT-----
 A C G T A C G T A C G T A C T G C G T A C G T A C T G A T A G C A G C T C G T A C G A T A C G T G T A C T C G A A T G C C A G T C T G A C T A G G C T A
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T A C G T A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GAAACTATTCVCTAGH
NNNNNGAACAATTGANN---
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C T G A T A G C A G C T C G T A C G A T A C G T G T A C T C G A A T G C C A G T C T G A C T A G G C T A
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T A C G T A C G T A C G T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:8
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:GAAACTATTCVCTAGH---
-------TTCTNNAGAANT
 A C T G C G T A C G T A C T G A T A G C A G C T C G T A C G A T A C G T G T A C T C G A A T G C C A G T C T G A C T A G G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T

PB0066.1_Sox17_1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GAAACTATTCVCTAGH
ATAAACAATTAAACA--
 A C G T A C T G C G T A C G T A C T G A T A G C A G C T C G T A C G A T A C G T G T A C T C G A A T G C C A G T C T G A C T A G G C T A
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A A C G T A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:10
Score:0.52
Offset:-7
Orientation:forward strand
Alignment:-------GAAACTATTCVCTAGH
ATAAACCGAAACCAA--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C T G A T A G C A G C T C G T A C G A T A C G T G T A C T C G A A T G C C A G T C T G A C T A G G C T A
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T