Information for 17-ACAGGACTSATGCCCT (Motif 26)

C G T A A G T C C G T A A C T G A C T G G T C A A T G C A G C T A T C G C G T A A C G T A C T G A G T C A G T C A G T C C G A T
Reverse Opposite:
C G T A A C T G A C T G C T A G A G T C G T C A C G A T A T G C C T G A A T C G A C G T T A G C A G T C A C G T C T A G G A C T
p-value:1e-8
log p-value:-1.996e+01
Information Content per bp:1.768
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.0 +/- 20.6bp
Average Position of motif in Background43.7 +/- 36.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.57
Offset:9
Orientation:forward strand
Alignment:ACAGGACTSATGCCCT--
---------ATGCCCACC
 C G T A A G T C C G T A A C T G A C T G G T C A A T G C A G C T A T C G C G T A A C G T A C T G A G T C A G T C A G T C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.55
Offset:5
Orientation:forward strand
Alignment:ACAGGACTSATGCCCT-----
-----GGGTGTGCCCAAAAGG
 C G T A A G T C C G T A A C T G A C T G G T C A A T G C A G C T A T C G C G T A A C G T A C T G A G T C A G T C A G T C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.55
Offset:10
Orientation:reverse strand
Alignment:ACAGGACTSATGCCCT--
----------TGACCTYA
 C G T A A G T C C G T A A C T G A C T G G T C A A T G C A G C T A T C G C G T A A C G T A C T G A G T C A G T C A G T C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.53
Offset:9
Orientation:forward strand
Alignment:ACAGGACTSATGCCCT--
---------CTGCCCGCA
 C G T A A G T C C G T A A C T G A C T G G T C A A T G C A G C T A T C G C G T A A C G T A C T G A G T C A G T C A G T C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

Six3/MA0631.1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:ACAGGACTSATGCCCT---
--ANANGTGATACCCTATN
 C G T A A G T C C G T A A C T G A C T G G T C A A T G C A G C T A T C G C G T A A C G T A C T G A G T C A G T C A G T C C G A T A C G T A C G T A C G T
A C G T A C G T T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0163.1_Six3/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:ACAGGACTSATGCCCT---
--ANANGTGATACCCTATN
 C G T A A G T C C G T A A C T G A C T G G T C A A T G C A G C T A T C G C G T A A C G T A C T G A G T C A G T C A G T C C G A T A C G T A C G T A C G T
A C G T A C G T T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0166.1_Six6_2/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:ACAGGACTSATGCCCT---
--AATNTTGATACCCTATN
 C G T A A G T C C G T A A C T G A C T G G T C A A T G C A G C T A T C G C G T A A C G T A C T G A G T C A G T C A G T C C G A T A C G T A C G T A C G T
A C G T A C G T T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:ACAGGACTSATGCCCT---
------CNNTTGACCTTTG
 C G T A A G T C C G T A A C T G A C T G G T C A A T G C A G C T A T C G C G T A A C G T A C T G A G T C A G T C A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

PH0161.1_Six1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:ACAGGACTSATGCCCT---
--ANNNATGATACCCCATC
 C G T A A G T C C G T A A C T G A C T G G T C A A T G C A G C T A T C G C G T A A C G T A C T G A G T C A G T C A G T C C G A T A C G T A C G T A C G T
A C G T A C G T G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

PH0165.1_Six6_1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:ACAGGACTSATGCCCT---
--ANANNTGATACCCTATN
 C G T A A G T C C G T A A C T G A C T G G T C A A T G C A G C T A T C G C G T A A C G T A C T G A G T C A G T C A G T C C G A T A C G T A C G T A C G T
A C G T A C G T T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T