Information for 8-KGACAATARGGSW (Motif 16)

A C T G A C T G C G T A A T G C C G T A C G T A A C G T C G T A C T A G A C T G A C T G A T G C C G T A
Reverse Opposite:
C G A T A T C G A G T C A G T C A G T C C G A T C G T A A C G T A C G T A T C G A C G T A G T C G T A C
p-value:1e-11
log p-value:-2.542e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.6 +/- 15.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:KGACAATARGGSW
-GACAATGNN---
 A C T G A C T G C G T A A T G C C G T A C G T A A C G T C G T A C T A G A C T G A C T G A T G C C G T A
A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----KGACAATARGGSW
TCACGGAACAATAGGTG-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A T G C C G T A C G T A A C G T C G T A C T A G A C T G A C T G A T G C C G T A
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----KGACAATARGGSW
NNNNNGAACAATTGANN-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A T G C C G T A C G T A A C G T C G T A C T A G A C T G A C T G A T G C C G T A
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---KGACAATARGGSW-
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C T G A C T G C G T A A T G C C G T A C G T A A C G T C G T A C T A G A C T G A C T G A T G C C G T A A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---KGACAATARGGSW
CTCACACAATGGCGC-
 A C G T A C G T A C G T A C T G A C T G C G T A A T G C C G T A C G T A A C G T C G T A C T A G A C T G A C T G A T G C C G T A
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----KGACAATARGGSW
TAGTGAACAATAGATTT
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A A T G C C G T A C G T A A C G T C G T A C T A G A C T G A C T G A T G C C G T A
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:KGACAATARGGSW
RAACAATGGN---
 A C T G A C T G C G T A A T G C C G T A C G T A A C G T C G T A C T A G A C T G A C T G A T G C C G T A
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:KGACAATARGGSW
GAACAATGGN---
 A C T G A C T G C G T A A T G C C G T A C G T A A C G T C G T A C T A G A C T G A C T G A T G C C G T A
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-KGACAATARGGSW
RNAACAATGG----
 A C G T A C T G A C T G C G T A A T G C C G T A C G T A A C G T C G T A C T A G A C T G A C T G A T G C C G T A
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:KGACAATARGGSW
GAACAATGG----
 A C T G A C T G C G T A A T G C C G T A C G T A A C G T C G T A C T A G A C T G A C T G A T G C C G T A
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T