Information for 24-GAGATAGCTATCT (Motif 38)

T A C G C G T A A C T G C G T A C G A T C G T A A T C G A T G C A C G T C G T A A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A C G A T C G T A A T C G A T G C A C G T C G T A A C G T A G T C A C G T A T G C
p-value:1e-6
log p-value:-1.419e+01
Information Content per bp:1.883
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.7 +/- 29.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GAGATAGCTATCT--
NAGATWNBNATCTNN
 T A C G C G T A A C T G C G T A C G A T C G T A A T C G A T G C A C G T C G T A A C G T A G T C A C G T A C G T A C G T
A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GAGATAGCTATCT-----
-NNNCTGATATCTCNNNN
 T A C G C G T A A C T G C G T A C G A T C G T A A T C G A T G C A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

GATA2/MA0036.2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GAGATAGCTATCT
NCAGATAAGAANNN
 A C G T T A C G C G T A A C T G C G T A C G A T C G T A A T C G A T G C A C G T C G T A A C G T A G T C A C G T
C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

TGIF1/MA0796.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GAGATAGCTATCT
-TGACAGCTGTCA
 T A C G C G T A A C T G C G T A C G A T C G T A A T C G A T G C A C G T C G T A A C G T A G T C A C G T
A C G T G C A T T C A G T C G A A G T C T C G A A C T G T A G C A G C T T A C G G C A T G T A C C G T A

PKNOX1/MA0782.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GAGATAGCTATCT
-TGACAGGTGTCA
 T A C G C G T A A C T G C G T A C G A T C G T A A T C G A T G C A C G T C G T A A C G T A G T C A C G T
A C G T G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A

TGIF2/MA0797.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAGATAGCTATCT
-TGACAGCTGTCA
 T A C G C G T A A C T G C G T A C G A T C G T A A T C G A T G C A C G T C G T A A C G T A G T C A C G T
A C G T G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A

PKNOX2/MA0783.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GAGATAGCTATCT
-TGACAGGTGTCA
 T A C G C G T A A C T G C G T A C G A T C G T A A T C G A T G C A C G T C G T A A C G T A G T C A C G T
A C G T C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GAGATAGCTATCT-
---AAGGATATNTN
 T A C G C G T A A C T G C G T A C G A T C G T A A T C G A T G C A C G T C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GAGATAGCTATCT
-AGATAASR----
 T A C G C G T A A C T G C G T A C G A T C G T A A T C G A T G C A C G T C G T A A C G T A G T C A C G T
A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GAGATAGCTATCT
-ACAAAGGNBCCT
 T A C G C G T A A C T G C G T A C G A T C G T A A T C G A T G C A C G T C G T A A C G T A G T C A C G T
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T