Information for 13-GCTCCGGAGCCCC (Motif 22)

A C T G A G T C A C G T A G T C A G T C A C T G A C T G C T G A A C T G A T G C A G T C A T G C A T G C
Reverse Opposite:
A T C G A T C G A C T G A T C G A G T C A G C T A G T C A G T C A C T G A C T G C G T A A C T G A G T C
p-value:1e-9
log p-value:-2.273e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.3 +/- 28.7bp
Average Position of motif in Background58.8 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GCTCCGGAGCCCC
GCTCCG-------
 A C T G A G T C A C G T A G T C A G T C A C T G A C T G C T G A A C T G A T G C A G T C A T G C A T G C
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCGGAGCCCC
GGCTCYAKCAYC--
 A C G T A C T G A G T C A C G T A G T C A G T C A C T G A C T G C T G A A C T G A T G C A G T C A T G C A T G C
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:3
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GCTCCGGAGCCCC
AANNATCCGGATGTNN
 A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A C T G A C T G C T G A A C T G A T G C A G T C A T G C A T G C
T C G A C T G A C T G A C G T A C G T A G A C T T A G C T G A C A C T G A C T G C G T A G C A T T C A G G A C T C T G A A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCGGAGCCCC
NGCTN---------
 A C G T A C T G A G T C A C G T A G T C A G T C A C T G A C T G C T G A A C T G A T G C A G T C A T G C A T G C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GCTCCGGAGCCCC
NRYTTCCGGY-----
 A C G T A C G T A C T G A G T C A C G T A G T C A G T C A C T G A C T G C T G A A C T G A T G C A G T C A T G C A T G C
G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T A C G T A C G T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:6
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GCTCCGGAGCCCC---
------AAGACCCYYN
 A C T G A G T C A C G T A G T C A G T C A C T G A C T G C T G A A C T G A T G C A G T C A T G C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GCTCCGGAGCCCC-
NGNTCTAGAACCNGV
 A C G T A C T G A G T C A C G T A G T C A G T C A C T G A C T G C T G A A C T G A T G C A G T C A T G C A T G C A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GCTCCGGAGCCCC-----
--NNNGGGGCGCCCCCNN
 A C T G A G T C A C G T A G T C A G T C A C T G A C T G C T G A A C T G A T G C A G T C A T G C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GCTCCGGAGCCCC---
-TGCCTGCGYCMCCTT
 A C T G A G T C A C G T A G T C A G T C A C T G A C T G C T G A A C T G A T G C A G T C A T G C A T G C A C G T A C G T A C G T
A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GCTCCGGAGCCCC
GGTCCCGCCC---
 A C T G A G T C A C G T A G T C A G T C A C T G A C T G C T G A A C T G A T G C A G T C A T G C A T G C
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T A C G T