Information for 5-GGCTCTGGTTTCTGTC (Motif 10)

A C T G A T C G A G T C A C G T A T G C A C G T A C T G A C T G A C G T A C G T A C G T A G T C A C G T A C T G A G C T A G T C
Reverse Opposite:
T C A G C T G A A G T C C G T A A C T G C G T A C G T A T C G A A G T C G T A C C G T A A T C G C G T A C T A G A T G C G T A C
p-value:1e-12
log p-value:-2.881e+01
Information Content per bp:1.908
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.0 +/- 21.7bp
Average Position of motif in Background49.0 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GGCTCTGGTTTCTGTC-
--GYCTGGYYTNTGTCA
 A C T G A T C G A G T C A C G T A T G C A C G T A C T G A C T G A C G T A C G T A C G T A G T C A C G T A C T G A G C T A G T C A C G T
A C G T A C G T A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGCTCTGGTTTCTGTC
GKMTCADRTTWC----
 A C T G A T C G A G T C A C G T A T G C A C G T A C T G A C T G A C G T A C G T A C G T A G T C A C G T A C T G A G C T A G T C
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GGCTCTGGTTTCTGTC
-----TGGTTTCAGT-
 A C T G A T C G A G T C A C G T A T G C A C G T A C T G A C T G A C G T A C G T A C G T A G T C A C G T A C T G A G C T A G T C
A C G T A C G T A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGCTCTGGTTTCTGTC--
-NNNTTGGTTTCGNTNNN
 A C T G A T C G A G T C A C G T A T G C A C G T A C T G A C T G A C G T A C G T A C G T A G T C A C G T A C T G A G C T A G T C A C G T A C G T
A C G T G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGCTCTGGTTTCTGTC
-GCTGTGGTTT-----
 A C T G A T C G A G T C A C G T A T G C A C G T A C T G A C T G A C G T A C G T A C G T A G T C A C G T A C T G A G C T A G T C
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGCTCTGGTTTCTGTC
GKVTCADRTTWC----
 A C T G A T C G A G T C A C G T A T G C A C G T A C T G A C T G A C G T A C G T A C G T A G T C A C G T A C T G A G C T A G T C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGCTCTGGTTTCTGTC
TGCTGTGATTT-----
 A C T G A T C G A G T C A C G T A T G C A C G T A C T G A C T G A C G T A C G T A C G T A G T C A C G T A C T G A G C T A G T C
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGCTCTGGTTTCTGTC
GTCTGTGGTTT-----
 A C T G A T C G A G T C A C G T A T G C A C G T A C T G A C T G A C G T A C G T A C G T A G T C A C G T A C T G A G C T A G T C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGCTCTGGTTTCTGTC
-NNTGTGGTTT-----
 A C T G A T C G A G T C A C G T A T G C A C G T A C T G A C T G A C G T A C G T A C G T A G T C A C G T A C T G A G C T A G T C
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GGCTCTGGTTTCTGTC---
----NTGGTTTCGGTTNNN
 A C T G A T C G A G T C A C G T A T G C A C G T A C T G A C T G A C G T A C G T A C G T A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T