Information for 14-GASCTAGCTG (Motif 17)

A C T G C G T A A T C G A G T C A C G T C G T A A C T G A G T C A C G T C T A G
Reverse Opposite:
A G T C C G T A A C T G A G T C A C G T G T C A A C T G A T G C A C G T A G T C
p-value:1e-10
log p-value:-2.459e+01
Information Content per bp:1.908
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif31.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets45.9 +/- 24.0bp
Average Position of motif in Background53.2 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GASCTAGCTG
TGACCTARTT-
 A C G T A C T G C G T A A T C G A G T C A C G T C G T A A C T G A G T C A C G T C T A G
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GASCTAGCTG---
---CCAGCTGTTN
 A C T G C G T A A T C G A G T C A C G T C G T A A C T G A G T C A C G T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GASCTAGCTG--
TTGACCTANTTATN
 A C G T A C G T A C T G C G T A A T C G A G T C A C G T C G T A A C T G A G T C A C G T C T A G A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GASCTAGCTG-
-NAHCAGCTGD
 A C T G C G T A A T C G A G T C A C G T C G T A A C T G A G T C A C G T C T A G A C G T
A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GASCTAGCTG
-----NGCTN
 A C T G C G T A A T C G A G T C A C G T C G T A A C T G A G T C A C G T C T A G
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GASCTAGCTG-
-NNACAGCTGC
 A C T G C G T A A T C G A G T C A C G T C G T A A C T G A G T C A C G T C T A G A C G T
A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GASCTAGCTG
TGACCTTGAT-
 A C G T A C T G C G T A A T C G A G T C A C G T C G T A A C T G A G T C A C G T C T A G
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GASCTAGCTG---
---NCAGCTGCTG
 A C T G C G T A A T C G A G T C A C G T C G T A A C T G A G T C A C G T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GASCTAGCTG--
----CAGCTGTT
 A C T G C G T A A T C G A G T C A C G T C G T A A C T G A G T C A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GASCTAGCTG----
--GCCAGCTGBTNB
 A C T G C G T A A T C G A G T C A C G T C G T A A C T G A G T C A C G T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C