Information for 3-GMCCCAGAGGNCAAAG (Motif 8)

A C T G G T C A G T A C A G T C G T A C C T G A A C T G C G T A A C T G C T A G A C T G A T G C C T G A G T C A C T G A A T C G
Reverse Opposite:
A T G C A G C T A C G T A G C T A T C G G T A C A G T C G T A C A C G T A G T C A G C T A C T G A C T G A C T G A C G T A G T C
p-value:1e-14
log p-value:-3.395e+01
Information Content per bp:1.800
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.2 +/- 28.0bp
Average Position of motif in Background55.3 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2F1/MA0017.2/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GMCCCAGAGGNCAAAG-
----CAAAGGTCAAGGG
 A C T G G T C A G T A C A G T C G T A C C T G A A C T G C G T A A C T G C T A G A C T G A T G C C T G A G T C A C T G A A T C G A C G T
A C G T A C G T A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GMCCCAGAGGNCAAAG
----CAAAGGTCAG--
 A C T G G T C A G T A C A G T C G T A C C T G A A C T G C G T A A C T G C T A G A C T G A T G C C T G A G T C A C T G A A T C G
A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GMCCCAGAGGNCAAAG
-----AGRGGTCA---
 A C T G G T C A G T A C A G T C G T A C C T G A A C T G C G T A A C T G C T A G A C T G A T G C C T G A G T C A C T G A A T C G
A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GMCCCAGAGGNCAAAG
-----TRAGGTCA---
 A C T G G T C A G T A C A G T C G T A C C T G A A C T G C G T A A C T G C T A G A C T G A T G C C T G A G T C A C T G A A T C G
A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GMCCCAGAGGNCAAAG
--GCCTCAGGGCAT--
 A C T G G T C A G T A C A G T C G T A C C T G A A C T G C G T A A C T G C T A G A C T G A T G C C T G A G T C A C T G A A T C G
A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GMCCCAGAGGNCAAAG----
----CANAGNNCAAAGTCCA
 A C T G G T C A G T A C A G T C G T A C C T G A A C T G C G T A A C T G C T A G A C T G A T G C C T G A G T C A C T G A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GMCCCAGAGGNCAAAG
--SCCTSAGGSCAW--
 A C T G G T C A G T A C A G T C G T A C C T G A A C T G C G T A A C T G C T A G A C T G A T G C C T G A G T C A C T G A A T C G
A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GMCCCAGAGGNCAAAG-
-TCTCAAAGGTCACGAG
 A C T G G T C A G T A C A G T C G T A C C T G A A C T G C G T A A C T G C T A G A C T G A T G C C T G A G T C A C T G A A T C G A C G T
A C G T C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

PB0118.1_Esrra_2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GMCCCAGAGGNCAAAG--
-GGCGAGGGGTCAAGGGC
 A C T G G T C A G T A C A G T C G T A C C T G A A C T G C G T A A C T G C T A G A C T G A T G C C T G A G T C A C T G A A T C G A C G T A C G T
A C G T T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:10
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GMCCCAGAGGNCAAAG----
------GAGGTCAAAGGTCA
 A C T G G T C A G T A C A G T C G T A C C T G A A C T G C G T A A C T G C T A G A C T G A T G C C T G A G T C A C T G A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A