Information for 19-CGCTCAAGCTAAT (Motif 23)

A G T C C A T G A G T C A C G T G T A C C G T A G T C A A C T G A T G C A C G T G T C A C G T A A C G T
Reverse Opposite:
G T C A A C G T A C G T C G T A A T C G A G T C A C G T A C G T A C T G C G T A A C T G G T A C C T A G
p-value:1e-9
log p-value:-2.076e+01
Information Content per bp:1.905
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif16.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets51.6 +/- 28.4bp
Average Position of motif in Background40.3 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESRRB/MA0141.3/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CGCTCAAGCTAAT-
---TCAAGGTCATA
 A G T C C A T G A G T C A C G T G T A C C G T A G T C A A C T G A T G C A C G T G T C A C G T A A C G T A C G T
A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

Esrra/MA0592.2/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CGCTCAAGCTAAT
--TTCAAGGTCAT
 A G T C C A T G A G T C A C G T G T A C C G T A G T C A A C T G A T G C A C G T G T C A C G T A A C G T
A C G T A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CGCTCAAGCTAAT
AGCCACTCAAG-----
 A C G T A C G T A C G T A G T C C A T G A G T C A C G T G T A C C G T A G T C A A C T G A T G C A C G T G T C A C G T A A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CGCTCAAGCTAAT
---TCAAGGTCAT
 A G T C C A T G A G T C A C G T G T A C C G T A G T C A A C T G A T G C A C G T G T C A C G T A A C G T
A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CGCTCAAGCTAAT
--BTCAAGGTCA-
 A G T C C A T G A G T C A C G T G T A C C G T A G T C A A C T G A T G C A C G T G T C A C G T A A C G T
A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CGCTCAAGCTAAT
---TCAAGGTCAN
 A G T C C A T G A G T C A C G T G T A C C G T A G T C A A C T G A T G C A C G T G T C A C G T A A C G T
A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGCTCAAGCTAAT-
AAGTTCAAGGTCAGC
 A C G T A G T C C A T G A G T C A C G T G T A C C G T A G T C A A C T G A T G C A C G T G T C A C G T A A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGCTCAAGCTAAT----
TATTCAAGGTCATGCGA
 A G T C C A T G A G T C A C G T G T A C C G T A G T C A A C T G A T G C A C G T G T C A C G T A A C G T A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CGCTCAAGCTAAT
--NTCAAGGTCA-
 A G T C C A T G A G T C A C G T G T A C C G T A G T C A A C T G A T G C A C G T G T C A C G T A A C G T
A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGCTCAAGCTAAT
NSCACTYVAV-----
 A C G T A C G T A G T C C A T G A G T C A C G T G T A C C G T A G T C A A C T G A T G C A C G T G T C A C G T A A C G T
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T