Information for 2-TGTTTACABW (Motif 2)

C A G T T A C G A C G T A G C T A G C T C T G A G A T C G C T A A G C T C G T A
Reverse Opposite:
G C A T T C G A C G A T C T A G A G C T T C G A T C G A T G C A A T G C G T C A
p-value:1e-25
log p-value:-5.856e+01
Information Content per bp:1.545
Number of Target Sequences with motif186.0
Percentage of Target Sequences with motif21.50%
Number of Background Sequences with motif4504.7
Percentage of Background Sequences with motif9.48%
Average Position of motif in Targets48.5 +/- 26.6bp
Average Position of motif in Background50.6 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:1
Score:0.88
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTACABW
CBTGTTTAYAWW
 A C G T A C G T C A G T T A C G A C G T A G C T A G C T C T G A G A T C G C T A A G C T C G T A
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:2
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTACABW-
NTGTTTAYATWW
 A C G T C A G T T A C G A C G T A G C T A G C T C T G A G A T C G C T A A G C T C G T A A C G T
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:3
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--TGTTTACABW
CNTGTTTACATA
 A C G T A C G T C A G T T A C G A C G T A G C T A G C T C T G A G A T C G C T A A G C T C G T A
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:TGTTTACABW
TGTTTACTTT
 C A G T T A C G A C G T A G C T A G C T C T G A G A T C G C T A A G C T C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:5
Score:0.85
Offset:-3
Orientation:forward strand
Alignment:---TGTTTACABW--
BSNTGTTTACWYWGN
 A C G T A C G T A C G T C A G T T A C G A C G T A G C T A G C T C T G A G A T C G C T A A G C T C G T A A C G T A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.84
Offset:0
Orientation:forward strand
Alignment:TGTTTACABW--
TGTTTACTTAGG
 C A G T T A C G A C G T A G C T A G C T C T G A G A T C G C T A A G C T C G T A A C G T A C G T
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:TGTTTACABW
TGTTTACTTT
 C A G T T A C G A C G T A G C T A G C T C T G A G A T C G C T A A G C T C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1/MA0148.3/Jaspar

Match Rank:8
Score:0.84
Offset:-4
Orientation:forward strand
Alignment:----TGTTTACABW-
TCCATGTTTACTTTG
 A C G T A C G T A C G T A C G T C A G T T A C G A C G T A G C T A G C T C T G A G A T C G C T A A G C T C G T A A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:9
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:TGTTTACABW
TGTTTACH--
 C A G T T A C G A C G T A G C T A G C T C T G A G A T C G C T A A G C T C G T A
A C G T A C T G A C G T A C G T A C G T C G T A A G T C G C T A A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:10
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTACABW
TNTGTTTACTT-
 A C G T A C G T C A G T T A C G A C G T A G C T A G C T C T G A G A T C G C T A A G C T C G T A
G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T A C G T