Information for 18-GAACAAAGGCTGG (Motif 18)

A C T G G T C A C G T A A T G C C G T A G T C A C G T A A C T G A T C G A G T C C G A T A C T G A C T G
Reverse Opposite:
A G T C A G T C G C T A A C T G A T G C A G T C A C G T A C G T A C G T A T C G C G A T A C G T A G T C
p-value:1e-9
log p-value:-2.145e+01
Information Content per bp:1.863
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif13.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets51.6 +/- 23.3bp
Average Position of motif in Background50.4 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GAACAAAGGCTGG
GGAACAAAGR----
 A C G T A C T G G T C A C G T A A T G C C G T A G T C A C G T A A C T G A T C G A G T C C G A T A C T G A C T G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GAACAAAGGCTGG
AAAACAAAGG----
 A C G T A C T G G T C A C G T A A T G C C G T A G T C A C G T A A C T G A T C G A G T C C G A T A C T G A C T G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GAACAAAGGCTGG
VRRACAAWGG----
 A C G T A C T G G T C A C G T A A T G C C G T A G T C A C G T A A C T G A T C G A G T C C G A T A C T G A C T G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GAACAAAGGCTGG
-AACAAAGG----
 A C T G G T C A C G T A A T G C C G T A G T C A C G T A A C T G A T C G A G T C C G A T A C T G A C T G
A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GAACAAAGGCTGG
GAACAATGGN---
 A C T G G T C A C G T A A T G C C G T A G T C A C G T A A C T G A T C G A G T C C G A T A C T G A C T G
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAACAAAGGCTGG
ACATCAAAGGNA--
 A C G T A C T G G T C A C G T A A T G C C G T A G T C A C G T A A C T G A T C G A G T C C G A T A C T G A C T G
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GAACAAAGGCTGG
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T A C G T A C T G G T C A C G T A A T G C C G T A G T C A C G T A A C T G A T C G A G T C C G A T A C T G A C T G
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Tcf7/MA0769.1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GAACAAAGGCTGG
AAAGATCAAAGG----
 A C G T A C G T A C G T A C T G G T C A C G T A A T G C C G T A G T C A C G T A A C T G A T C G A G T C C G A T A C T G A C T G
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GAACAAAGGCTGG
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C T G G T C A C G T A A T G C C G T A G T C A C G T A A C T G A T C G A G T C C G A T A C T G A C T G
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

TCF7L2/MA0523.1/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GAACAAAGGCTGG
AAAGATCAAAGGAA--
 A C G T A C G T A C G T A C T G G T C A C G T A A T G C C G T A G T C A C G T A A C T G A T C G A G T C C G A T A C T G A C T G
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T