Information for 7-ARAGGGCAAAGTT (Motif 5)

C T G A T C G A C G T A A C T G C T A G C T A G G T A C C G T A C T G A C G T A C A T G C A G T A C G T
Reverse Opposite:
T G C A G C T A G A T C A C G T A G C T A C G T C A T G G A T C A G T C A G T C A C G T A G C T A G C T
p-value:1e-14
log p-value:-3.384e+01
Information Content per bp:1.720
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif6.47%
Number of Background Sequences with motif593.4
Percentage of Background Sequences with motif1.31%
Average Position of motif in Targets54.1 +/- 25.4bp
Average Position of motif in Background49.4 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:ARAGGGCAAAGTT--
AGAGTCCAAAGTCCA
 C T G A T C G A C G T A A C T G C T A G C T A G G T A C C G T A C T G A C G T A C A T G C A G T A C G T A C G T A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-ARAGGGCAAAGTT--
CANAGNNCAAAGTCCA
 A C G T C T G A T C G A C G T A A C T G C T A G C T A G G T A C C G T A C T G A C G T A C A T G C A G T A C G T A C G T A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

Tcf7/MA0769.1/Jaspar

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:ARAGGGCAAAGTT
AAAGATCAAAGG-
 C T G A T C G A C G T A A C T G C T A G C T A G G T A C C G T A C T G A C G T A C A T G C A G T A C G T
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T

LEF1/MA0768.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ARAGGGCAAAGTT--
AAAGATCAAAGGGTT
 C T G A T C G A C G T A A C T G C T A G C T A G G T A C C G T A C T G A C G T A C A T G C A G T A C G T A C G T A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

Hnf4a/MA0114.3/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:ARAGGGCAAAGTT----
-GGGGTCAAAGTCCAAT
 C T G A T C G A C G T A A C T G C T A G C T A G G T A C C G T A C T G A C G T A C A T G C A G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ARAGGGCAAAGTT--
-TAGGGCAAAGGTCA
 C T G A T C G A C G T A A C T G C T A G C T A G G T A C C G T A C T G A C G T A C A T G C A G T A C G T A C G T A C G T
A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

TCF7L2/MA0523.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ARAGGGCAAAGTT-
AAAGATCAAAGGAA
 C T G A T C G A C G T A A C T G C T A G C T A G G T A C C G T A C T G A C G T A C A T G C A G T A C G T A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ARAGGGCAAAGTT--
-GAGGTCAAAGGTCA
 C T G A T C G A C G T A A C T G C T A G C T A G G T A C C G T A C T G A C G T A C A T G C A G T A C G T A C G T A C G T
A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ARAGGGCAAAGTT----
AAAGGTCAAAGGTCAAC
 C T G A T C G A C G T A A C T G C T A G C T A G G T A C C G T A C T G A C G T A C A T G C A G T A C G T A C G T A C G T A C G T A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ARAGGGCAAAGTT--
GTAGGGCAAAGGTCA
 C T G A T C G A C G T A A C T G C T A G C T A G G T A C C G T A C T G A C G T A C A T G C A G T A C G T A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A