Information for 17-CTAATCAGGA (Motif 17)

A G T C A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C G T A C T G C G T A A C G T A C G T C G T A A C T G
p-value:1e-5
log p-value:-1.278e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.3 +/- 29.0bp
Average Position of motif in Background73.1 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Lhx8/MA0705.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CTAATCAGGA
CTAATTAG--
 A G T C A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C T G C G T A
A G T C A G C T T C G A C G T A A C G T A G C T C T G A T C A G A C G T A C G T

EVX2/MA0888.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CTAATCAGGA
NNTAATTANN-
 A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C T G C G T A
T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CTAATCAGGA---
NNTAATCCNGNCNN
 A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C G T A C G T
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

EVX1/MA0887.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CTAATCAGGA
GNTAATTANN-
 A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C T G C G T A
A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C A C G T

PH0098.1_Lhx8/Jaspar

Match Rank:5
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----CTAATCAGGA--
CACCGCTAATTAGNNGN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

LHX6/MA0658.1/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTAATCAGGA
ACTAATTAGC-
 A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C T G C G T A
T C G A A G T C A G C T T C G A G T C A A G C T A G C T C T G A T C A G A G T C A C G T

PH0097.1_Lhx6_2/Jaspar

Match Rank:7
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----CTAATCAGGA--
NNNCGCTAATTAGNNGA
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C G T
T G C A G C T A G A T C G T A C T C A G G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G C T C A T G A C T G C G T A

PH0089.1_Isx/Jaspar

Match Rank:8
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CTAATCAGGA--
ACNNCTAATTAGNNNN
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C G T A C G T
G C T A A T G C T A C G T G C A G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C T G C T G A A C T G C G A T

PAX4/MA0068.2/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CTAATCAGGA
CTAATTAG--
 A G T C A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C T G C G T A
A G T C C A G T G C T A C G T A A C G T G C A T G T C A T C A G A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CTAATCAGGA
TTAATCCG--
 A G T C A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C T G C G T A
G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T