Information for 16-GAATAACCCA (Motif 15)

A C T G C T G A C G T A A C G T C T G A C G T A A G T C A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G C T A G A C G T A G C T C G T A A C G T A G C T A G T C
p-value:1e-7
log p-value:-1.702e+01
Information Content per bp:1.919
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif14.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets48.3 +/- 31.0bp
Average Position of motif in Background54.7 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GAATAACCCA
--ATAATCCC
 A C T G C T G A C G T A A C G T C T G A C G T A A G T C A G T C A G T C C G T A
A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GAATAACCCA
ATGCATAATTCA
 A C G T A C G T A C T G C T G A C G T A A C G T C T G A C G T A A G T C A G T C A G T C C G T A
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAATAACCCA
GGAAATCCCC-
 A C G T A C T G C T G A C G T A A C G T C T G A C G T A A G T C A G T C A G T C C G T A
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GAATAACCCA-
---TAATCCCN
 A C T G C T G A C G T A A C G T C T G A C G T A A G T C A G T C A G T C C G T A A C G T
A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAATAACCCA---
ATGAATWATTCATGA
 A C G T A C G T A C T G C T G A C G T A A C G T C T G A C G T A A G T C A G T C A G T C C G T A A C G T A C G T A C G T
G T C A A C G T C T A G G T C A C G T A G C A T C G T A C G T A G C A T C A G T A G T C C G T A C A G T C T A G C T G A

Pitx1/MA0682.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GAATAACCCA
--TTAATCCC
 A C T G C T G A C G T A A C G T C T G A C G T A A G T C A G T C A G T C C G T A
A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAATAACCCA
-CTTAATCCC
 A C T G C T G A C G T A A C G T C T G A C G T A A G T C A G T C A G T C C G T A
A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

PB0185.1_Tcf1_2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAATAACCCA-----
-NNTAATCCNGNCNN
 A C T G C T G A C G T A A C G T C T G A C G T A A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

JDP2/MA0655.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GAATAACCCA-
--ATGACTCAT
 A C T G C T G A C G T A A C G T C T G A C G T A A G T C A G T C A G T C C G T A A C G T
A C G T A C G T T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T

NFE2/MA0841.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAATAACCCA--
-CATGACTCATC
 A C T G C T G A C G T A A C G T C T G A C G T A A G T C A G T C A G T C C G T A A C G T A C G T
A C G T T G A C T C G A G A C T A C T G G T C A T A G C A G C T G A T C T G C A A G C T A T G C