Information for 6-AAAGTTCAACCTTCTA (Motif 10)

C G T A C G T A C G T A A C T G A C G T A C G T A G T C C G T A C G T A G T A C A T G C A C G T C G A T A G T C A C G T C T G A
Reverse Opposite:
A G C T C G T A A C T G C G T A C G T A A T C G C A T G A C G T A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C G T
p-value:1e-8
log p-value:-2.060e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets78.2 +/- 5.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AAAGTTCAACCTTCTA
GGCAAAAGTCCAATAA----
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C G T A G T C C G T A C G T A G T A C A T G C A C G T C G A T A G T C A C G T C T G A
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AAAGTTCAACCTTCTA
TCTCAAAGGTCACCTG----
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C G T A G T C C G T A C G T A G T A C A T G C A C G T C G A T A G T C A C G T C T G A
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AAAGTTCAACCTTCTA
ANGNAAAGGTCA--------
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C G T A G T C C G T A C G T A G T A C A T G C A C G T C G A T A G T C A C G T C T G A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AAAGTTCAACCTTCTA
TCTCAAAGGTCACGAG----
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C G T A G T C C G T A C G T A G T A C A T G C A C G T C G A T A G T C A C G T C T G A
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------AAAGTTCAACCTTCTA
AGAGTCCAAAGTCCA--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C G T A G T C C G T A C G T A G T A C A T G C A C G T C G A T A G T C A C G T C T G A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.58
Offset:-8
Orientation:forward strand
Alignment:--------AAAGTTCAACCTTCTA
CANAGNNCAAAGTCCA--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C G T A G T C C G T A C G T A G T A C A T G C A C G T C G A T A G T C A C G T C T G A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAAGTTCAACCTTCTA
CAAAGGTCAG-------
 A C G T C G T A C G T A C G T A A C T G A C G T A C G T A G T C C G T A C G T A G T A C A T G C A C G T C G A T A G T C A C G T C T G A
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAAGTTCAACCTTCTA-
AAAGGTCAAAGGTCAAC
 C G T A C G T A C G T A A C T G A C G T A C G T A G T C C G T A C G T A G T A C A T G C A C G T C G A T A G T C A C G T C T G A A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

PB0161.1_Rxra_2/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AAAGTTCAACCTTCTA--
--NNNNCAACCTTCGNGA
 C G T A C G T A C G T A A C T G A C G T A C G T A G T C C G T A C G T A G T A C A T G C A C G T C G A T A G T C A C G T C T G A A C G T A C G T
A C G T A C G T G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A

Hnf4a/MA0114.3/Jaspar

Match Rank:10
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------AAAGTTCAACCTTCTA
GGGGTCAAAGTCCAAT------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C G T A G T C C G T A C G T A G T A C A T G C A C G T C G A T A G T C A C G T C T G A
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T A C G T A C G T A C G T A C G T A C G T A C G T