Information for 9-GTSACCTGGCTTY (Motif 9)

A T C G A C G T A T C G C G T A A G T C A G T C A C G T A C T G A T C G A G T C A C G T A C G T A G T C
Reverse Opposite:
C T A G C G T A C G T A C T A G A T G C G T A C C G T A A C T G A C T G A C G T A T G C C G T A A T G C
p-value:1e-12
log p-value:-2.908e+01
Information Content per bp:1.910
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.2 +/- 22.0bp
Average Position of motif in Background42.7 +/- 45.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF1/MA0093.2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTSACCTGGCTTY
GGTCACGTGGC---
 A C G T A T C G A C G T A T C G C G T A A G T C A G T C A C G T A C T G A T C G A G T C A C G T A C G T A G T C
C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTSACCTGGCTTY
GGTCACATGAC---
 A C G T A T C G A C G T A T C G C G T A A G T C A G T C A C G T A C T G A T C G A G T C A C G T A C G T A G T C
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTSACCTGGCTTY
GTGACCTT-----
 A T C G A C G T A T C G C G T A A G T C A G T C A C G T A C T G A T C G A G T C A C G T A C G T A G T C
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTSACCTGGCTTY
-TGACCTTGAT--
 A T C G A C G T A T C G C G T A A G T C A G T C A C G T A C T G A T C G A G T C A C G T A C G T A G T C
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTSACCTGGCTTY
NTGACCTTGA---
 A T C G A C G T A T C G C G T A A G T C A G T C A C G T A C T G A T C G A G T C A C G T A C G T A G T C
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTSACCTGGCTTY
GTCACGTGGM---
 A T C G A C G T A T C G C G T A A G T C A G T C A C G T A C T G A T C G A G T C A C G T A C G T A G T C
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTSACCTGGCTTY
RYHYACCTGB----
 A C G T A T C G A C G T A T C G C G T A A G T C A G T C A C G T A C T G A T C G A G T C A C G T A C G T A G T C
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTSACCTGGCTTY
-TGACCT------
 A T C G A C G T A T C G C G T A A G T C A G T C A C G T A C T G A T C G A G T C A C G T A C G T A G T C
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

CREB3L1/MA0839.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTSACCTGGCTTY
TGATGACGTGGCAN-
 A C G T A C G T A T C G A C G T A T C G C G T A A G T C A G T C A C G T A C T G A T C G A G T C A C G T A C G T A G T C
G A C T C T A G T C G A G A C T A C T G G C T A A G T C A T C G A G C T C T A G C A T G G A T C C T G A A G C T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GTSACCTGGCTTY
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T A T C G A C G T A T C G C G T A A G T C A G T C A C G T A C T G A T C G A G T C A C G T A C G T A G T C
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A