Information for 8-TGGACTTTGK (Motif 4)

C G A T A C T G C T A G G T C A A T G C A C G T A G C T C G A T C T A G C A T G
Reverse Opposite:
G T A C A G T C C G T A T C G A T G C A T A C G A C G T G A T C G T A C C G T A
p-value:1e-24
log p-value:-5.751e+01
Information Content per bp:1.728
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif8.99%
Number of Background Sequences with motif874.4
Percentage of Background Sequences with motif1.93%
Average Position of motif in Targets50.9 +/- 27.2bp
Average Position of motif in Background50.8 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGK------
TGGACTTTGNNCTNTG
 C G A T A C T G C T A G G T C A A T G C A C G T A G C T C G A T C T A G C A T G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGK-----
TGGACTTTGNNCTCN
 C G A T A C T G C T A G G T C A A T G C A C G T A G C T C G A T C T A G C A T G A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.87
Offset:-4
Orientation:reverse strand
Alignment:----TGGACTTTGK--
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T C G A T A C T G C T A G G T C A A T G C A C G T A G C T C G A T C T A G C A T G A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Hnf4a/MA0114.3/Jaspar

Match Rank:4
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--TGGACTTTGK----
ATTGGACTTTGACCCC
 A C G T A C G T C G A T A C T G C T A G G T C A A T G C A C G T A G C T C G A T C T A G C A T G A C G T A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-TGGACTTTGK
CTGACCTTTG-
 A C G T C G A T A C T G C T A G G T C A A T G C A C G T A G C T C G A T C T A G C A T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TGGACTTTGK--
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A C G T C G A T A C T G C T A G G T C A A T G C A C G T A G C T C G A T C T A G C A T G A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.66
Offset:4
Orientation:forward strand
Alignment:TGGACTTTGK
----CTTTGT
 C G A T A C T G C T A G G T C A A T G C A C G T A G C T C G A T C T A G C A T G
A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

RXRG/MA0856.1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGK----
TGACCTTTGACCCC
 C G A T A C T G C T A G G T C A A T G C A C G T A G C T C G A T C T A G C A T G A C G T A C G T A C G T A C G T
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TGGACTTTGK--
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A C G T C G A T A C T G C T A G G T C A A T G C A C G T A G C T C G A T C T A G C A T G A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Rxra/MA0512.2/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGGACTTTGK----
TGACCTTTGACCCC
 C G A T A C T G C T A G G T C A A T G C A C G T A G C T C G A T C T A G C A T G A C G T A C G T A C G T A C G T
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C